Stereum hirsutum: STEHIDRAFT_146311
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Entry
STEHIDRAFT_146311 CDS
T03127
Name
(RefSeq) WD40 repeat-like protein
KO
K11374
elongator complex protein 2
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shs03016
]
STEHIDRAFT_146311
Transfer RNA biogenesis [BR:
shs03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
STEHIDRAFT_146311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_IFT122_1st
Tricorn_2nd
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
18799537
NCBI-ProteinID:
XP_007302905
JGI:
Stehi1_146311
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MTEASVEYIAASANRFHHAAVNDSSSLIVYGSGKFVALWDTEDPSDRGVYSTLVGHTGLV
TCLKFIDGPQGRLVSADDTGNVRIWRREGTKFKSTLNVQAHSKSISALGYHEGCLVTGAS
DSSIKVWQLGPDDDLKEVQTISLKNKYPLSVELDFLPGTKARVLAIGTTSPSIQIYTRSE
DQFVLSATLSGHEDWVRSLSFRPPLTSQDSAVRSDPLILASGAQDSTIRLWNIEPFSAQK
SDRPDNQGKPQLTDELLDAFEASLGESNAEEGGRQISLKKHVLTITGDDGSPQQFSVTFD
ALLVGHEAGVTSLSWRPDLSSSSSTNGSSPPLTLLSTSTDSSLILWSPSPILTTPNQPTE
TTTIWVNRQRFGDVGGQRLGGFVGGIWARSGKEALAWGWAGGWRRWRADESSGAGGAAEM
WTEVGAVTGHAGPVRGISWAPNGEYLASTGIDQTTRIHGAIPSLLPAGTKAVAWHELARP
QVHGYDLVGVAFIDVLKLVSVADEKVARVFEGPRAFVKTVKGLDVADLGVDEADRPVGAS
VPPLGLSNKATNDTNAQPFTFDGEDEHLRRPFEGELAAMTLWPEIEKVFGHGYESITVSI
SNSRKLMATACRATTAKHAVVRLYDTEKFHSVGEPLEGHALTVTRIAFSPDDRHVLTVSR
DRTWRLFRVKEEGVGYVPVAADKSHTRIIWDCSWSPQGDIFATASRDKTVKIWTLKETTD
AEKWTATATIKLKEAATAVAFGKDHDSQRVLAVGLETGHIHIYTGATPANWTLSTIVNPG
MAHIDQIYQMAWRPDVGENEELRHLASCSEDGTLRILSIRLGRG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggcatccgtcgaatacatcgccgcctcggcgaacagatttcatcatgcggca
gttaatgactcgtcctctctcatcgtctatggctctggaaagtttgttgcgctctgggat
actgaggatccttccgaccggggcgtttactccactcttgttggccacactggcctcgta
acctgcttgaaatttatcgatggtccgcagggtaggcttgtcagtgcagatgacacggga
aatgttaggatatggagaagagaggggaccaagttcaaatctactctgaacgtgcaagca
cattcgaaatcgatatctgcacttggatatcacgaaggatgtttggtgacaggggcttca
gattcttcaatcaaggtgtggcaactgggtcctgatgatgacttgaaggaggtgcaaacg
atttcactcaagaataaatatcccctctctgtggagcttgatttccttcctggtactaaa
gccagagtactcgctatcggcacaacgagcccaagcatccagatctatactcgttcagag
gatcagttcgttctatcggcgacgctttctggccacgaagactgggtccgttcgctctca
ttccgaccaccattgacatcccaagactctgctgtacggtcagaccctctgattctcgcc
tccggtgctcaagattctaccatccgtctgtggaatatcgaaccattttcagcccaaaag
tcggatcgtcccgacaaccagggaaaacctcaattgacggatgagttgcttgatgccttc
gaagcgtcgttgggtgaatcgaatgccgaagagggtggaagacagatctcgttgaagaag
catgtactgaccatcacaggcgacgatgggagtccacagcagttctcagtcaccttcgat
gcactcctcgtaggccatgaagctggtgtaacttctctatcatggcgaccggacctatca
tcctcatcatctacgaacggatcatcacccccattgactctcctgtccacatcaacagac
tcatccctcatcctctggtctccctcccccatcctcaccaccccaaatcagccaaccgaa
acaacgacaatctgggtcaaccgtcaacgtttcggagacgttggcggtcaacgattggga
ggtttcgtcggtgggatctgggccaggagtgggaaggaggcacttgcgtggggatgggcg
ggcgggtggaggagatggagggccgacgaatcttctggtgcaggaggtgcggcggagatg
tggactgaggttggagcggttacaggacatgcgggtcctgttaggggcatatcgtgggct
ccaaacggagagtatctcgcttcgactggaatcgaccaaacgacgcgtatacacggcgct
attccctccttgctaccggctggaacgaaggcagtagcatggcacgagctcgcgcgtcct
caagtacatggatacgacctcgtcggggtcgccttcatcgatgtactcaagctcgttagc
gtcgcggatgaaaaagtagcccgcgtttttgaaggtcccagagcatttgtgaagaccgtc
aagggtctagatgttgctgaccttggagtggatgaggcggatcggccagtcggagccagc
gtcccacctcttgggctgtcaaataaggccaccaacgataccaacgcgcagccttttacc
tttgacggcgaggatgaacacctcagacgcccattcgaaggagaattagcggccatgact
ctatggcccgagattgaaaaggtcttcggacacggttacgagtcaatcacagtctccatc
tcaaactcgcgcaaactcatggccacagcctgcagagccacaaccgcaaaacacgccgtc
gtccgcctctacgacaccgagaaattccacagcgttggcgaacctctcgaaggccatgct
ctgaccgtaactcggatcgcgttcagcccagatgatagacacgttctgactgtctcgaga
gaccggacgtggcgattgttcagagtcaaggaggaaggcgtgggatacgtccctgtcgcc
gcggacaagtcccacacccgtatcatctgggactgttcgtggtctccccaaggcgatata
tttgcaacagcttcgcgtgataaaacggtgaagatatggacattaaaagagaccactgac
gcagaaaagtggacggcgacggcgacaatcaagttgaaggaagcggcgacggcagtggca
tttgggaaggaccacgacagccaacgcgtccttgccgtaggtctcgagacgggccacatc
catatctacacgggcgccactccagccaactggacgctctcgacgattgtcaaccctggg
atggcgcacatagaccagatctatcagatggcatggcggccggacgtgggtgagaacgaa
gaattgagacatttggcgagctgtagtgaagatggtacattgagaatactaagcatccgg
ctaggtagaggttga
DBGET
integrated database retrieval system