Stereum hirsutum: STEHIDRAFT_148719
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Entry
STEHIDRAFT_148719 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
shs
Stereum hirsutum
Pathway
shs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
STEHIDRAFT_148719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_148719
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
STEHIDRAFT_148719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
18799835
NCBI-ProteinID:
XP_007307084
JGI:
Stehi1_148719
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MSATNPTTPIRAIPSSLAPRTAPTLPPSSETYEPHVRSVLQQRLLHRIFLPSAGLTWFVS
WLSIIQLLDGGNGVGVWGAFKVLFRPSTIVITAVTWLMGVVPVVVLRKRVMSAQPTVSSS
PYQTLKAALSKPTTSRALLTYLASAALQTVLHIILCYAIPLSTYGADDPYLRLFVKSRKH
SYYLNGRFIFLFFSQLYFAAAYLLRNIMLDRFVAHWTPRNSPAKGAPTLSTRLFVTLLPT
LLFTTLSYAVYLTGFVALRSIVFPIVYRVPLVNSILKPFTAHWARGEWIGTLALRELGSL
FGGGYGIVRMAWLWAVGMIGCWEFVDNLMDECVQEIIIAPVAPATLISTLPATTTIPTTP
PLAAYYSLHAMTQLSALASEDSPSASAVRAKDIFKFTGVGAGLGRRGGEEVDVWGVLCRE
SLRVLGEDYQRLKRRGAPPPAPAPPAEPAKPTSTAPPPPSTPLIRRPIFKSSVSPSPNPV
ASSSQSPLKSVVDSFAADGTITQAFESGVQTIHLPELFRASVNTLTAPVKDAVMKIDPIP
APPPIESDGSLGQELAKWGHGLAAGLRDGMGAGAGNMPVTMPRGVKEARDRVADWWSGDR
VDKVAEVVLSNERRELDALIADVLSHLVCKSLTEDSYGVVQRDIPRILEAFLTFLSAVED
YQVELRGLMPPPSSEDTNVLERERSERKREQVERASIAMGVVGDALKEGVIRIVRTFGGK
LSAFKFPMGTARKLQGFVDYCA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaacaaatccaacgactccaatacgcgcaataccgtcgtcactcgcaccacga
accgcgcccacacttccgccatcctcggaaacatacgaaccgcatgtgcgatccgtcctt
cagcaacgtctcctccatcgcatatttctgccttcagctggtcttacttggttcgtgtct
tggctgtctatcatccaactactggatggagggaatggtgtgggtgtatggggtgctttc
aaggtgctatttaggccgagcacaatagttatcacagctgtgacttggttaatgggtgta
gtccctgtggtagtgttgaggaaacgagtgatgagcgcacaaccaacggtctcttcatcg
ccttaccagacacttaaggctgctctttcaaaaccaacgacaagtcgtgcgcttttaacc
tatctagcctcggccgccctccaaacagtactgcacataatcctctgttatgctatcccg
ctctccacatatggcgccgacgacccgtatctacgcctttttgtcaaatcgaggaagcac
tcatactacctcaacggtcgcttcatcttcctttttttcagccagctctatttcgctgcc
gcgtatctcctccgaaatatcatgttggaccgttttgtcgctcactggacccctcgaaat
tctcccgcgaaaggcgcaccgactctctcgacccggctcttcgtgactcttcttcctacc
cttcttttcaccacactgtcctacgccgtctacctaacaggctttgttgctttgcgttcc
atcgtcttcccgatcgtctaccgtgtcccattggtgaacagcattctgaagccatttact
gcgcattgggcgagaggcgaatggattgggacgttggcgttgagagagctcggaagtcta
ttcggaggaggatatgggattgtccgaatggcctggttgtgggcagtggggatgattggg
tgttgggagtttgtggataatctgatggatgagtgtgtccaagagataataattgccccg
gtcgcccccgccactctgatatcaactctcccggccacaaccacaatcccgaccacacca
ccgctcgcagcttactacagccttcacgcaatgacacagctctccgcccttgcgtcggaa
gactcgcccagcgcgagtgctgttcgcgcgaaggacatattcaaattcacgggtgtaggg
gcgggcttgggaaggagaggtggtgaagaggtggatgtgtggggtgtgctttgcagggag
agcttgagggtgcttggtgaagattatcaaaggttgaagaggaggggagctccacctccg
gccccagcacctcccgccgaaccagcaaaaccaacctcaaccgccccacccccgccttcc
acgcccctcatccgtcgtcccatcttcaaatcatcagtgtccccctccccgaaccccgtc
gcctcttcctcccagtcgccactcaaatccgtagtcgacagcttcgcagcggatggcacg
atcacccaggccttcgaatcgggcgttcagaccatacacttaccagagctgttcagggct
tctgtgaacacgcttacggcgcctgtgaaggatgcggtgatgaagatcgatcctatacct
gctcctccgccaatagagtcggatggttcgctaggccaggagctcgcaaaatggggacac
ggattggcagcgggacttcgggatgggatgggggcgggagcggggaatatgccggtgacg
atgccgaggggagtgaaggaggcgagggacagggtcgcggattggtggtctggggatagg
gtggataaggttgcggaggtggtattgtcgaacgagaggagagagctggatgcgttgatt
gcggatgtcctctcccacctcgtctgtaaatccctcaccgaagattcatacggagtagtc
caacgcgatatcccacgcatactcgaggcgttcctcactttcctttccgcagtcgaagat
tatcaggtcgagttgcgtggattgatgcctccaccttcgtccgaggacacgaatgtgttg
gagagggagcggtcggagagaaaaagagagcaggtggagagagcgagcattgcgatgggg
gtcgtcggggatgcgttgaaagagggcgttattcgtattgttcgaacctttggtggcaag
cttagcgctttcaagttcccgatgggcacggcgaggaagttgcagggtttcgtcgattat
tgtgcatag
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integrated database retrieval system