Stereum hirsutum: STEHIDRAFT_149084
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Entry
STEHIDRAFT_149084 CDS
T03127
Name
(RefSeq) RNI-like protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shs04121
]
STEHIDRAFT_149084
Ubiquitin system [BR:
shs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
STEHIDRAFT_149084
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
F-box-like
LRR_4
F-box
Motif
Other DBs
NCBI-GeneID:
18799877
NCBI-ProteinID:
XP_007307696
JGI:
Stehi1_149084
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MDGDFSTSTASLEHVVSDGPRVSLPPPTPNEPSSSSSSSADSPSSPIAIDKGKGVSRAAR
GALEEDEEHADLFSMSFDSEAGFTHPTVTSPDASSPFTSHDPDFGSYHPTHDISMSMSLQ
DDDLPFTTTSDKGKGKGRDLPPTLPPLTFSPTEFSYDDMYGSGSPSTFSSSNDPGPSSFG
SIYTTATTTGQDPSPVETTTAQSQSPVTPSPAQAQDNTPNPMPVLIRMPSRRRSLSNLSM
HSTHSVAARSVSRVRMRLTSVSANTRGPSTLARKLFKRGDQSPSSAITTNSPTPSPSATP
SPSPYVDGRFDFDFDSIQACEVGCFTPWRRRSDRDRDGGHSNSPSPSSSIPNCFNVDIEQ
IMAQELPVAESYYPPIQTHPSSQSTSTSISTSQVQRHIPRPTRESAFPLNLKGKGRSYSS
PFPLVSALDLVPLSPSLTHSDVFVPLPLALTFPVKAVAVEQESKPRNAFEEKPEKLRSAF
EEMLPREVRLHVFACLVHGREEEHVRRMGEGRWTVHKAGSSKNRWVGREQGVRELVRMSR
VCKSWMGLVFDGQLWTDLDVRPFPKMPPSQIMHIAKSAGPFIKTLSLAGHTSFLPSSLQT
LTDSLSLRSTTANNTLLTSVDLTGCSSLTTPALHHLLRRSPLLNVLKLRALNAVTNETCE
IIYESCKVLEVLDMSRCKLISGAGIRSMAAFALRDQKALKLRELRLSGLKGITDGMMESL
GRVAPGIEVLDLSYCKDLHNSSIEAFTACPLDMSDMVDVLDPEMETVVLSAREAGREYDS
NGYAANRYRRRVTRLRHLSLSSCGLLTDIACSHLAYAMPRLEMLELGGIGAEMKDEGLVR
LLETLPGIRKVDLEDASEITDKVLEALTPSRSHGEEDDGEEEREEEGEGEPGSKLEHLVV
SYAVHLSNEAFLALITNCHHLKVLEADSTRLSGPTLKTFVNRARERSIRDATVVAIDCRS
VGEGVLKELAGEDKVRARKGQRKFETRKLGYLDGRDDEGLGVGMDECDEGRVVVKTFYSW
QSVDAVTAARAKRKRTRKAALGGRDRDRDTDLETDAVGDEEGGSGLGTGIGGGGSRGIGA
AGLGAGRARWWSPGGGNGRLRGSAGGANTPSLLDLHNERDGCTIM
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacttctctacctcgacggccagtctcgagcacgtcgtctcggacggtccc
agagtctctctgccgccccctacccctaacgaaccatcttcctcttcctcttcgtctgcc
gactcgccttcgtctccaatcgctatcgacaagggaaagggagtctctagagcagctagg
ggggctctcgaagaagacgaagaacatgcggatctgttctccatgtctttcgattccgag
gcaggcttcacccatcctaccgtgacatcacccgacgcatcatcccctttcacctctcat
gaccccgatttcggatcctatcacccaacacacgacatctccatgtctatgtccctccaa
gatgacgacctccctttcaccaccaccagcgacaaaggcaaaggcaaaggcagagatcta
ccgccgactcttccccctctgacgttctcgcccaccgaattcagctacgacgatatgtac
ggttctggctctccatccacgttctcttcttccaacgacccaggtccgtcctctttcggc
tctatctacaccaccgccacaacgaccggtcaagatcctagtcccgtggagaccacgacg
gctcaatctcagtctcccgtcaccccctctccagcacaagcacaagacaacactccgaac
ccgatgccagtcctcatccggatgccctccagacgcagatcgctctctaatctttctatg
cattctacgcattccgtcgccgcacgatccgtgtcccgcgtcaggatgcgtctcacctcc
gtttctgctaatactagaggcccgtctacactcgcgcgcaagctcttcaagcgcggggat
caatcgccctcttctgccatcaccaccaacagtcctacgccctccccttccgctacaccc
tctccttcaccgtatgtagacgggagattcgactttgactttgattcgatccaggcttgt
gaagtcggttgcttcacgccttggagacggaggtcagatagggatagggatggcggccac
tcaaattcgcccagtccatcgagcagtatccctaactgttttaatgtcgatatcgagcag
attatggctcaagaactgcccgtcgcggaatcttactacccgcccatccaaacccacccc
tcctcccaatccacatccacatccatatccacatcccaagttcaaaggcatatcccccgc
cccacgcgcgaatccgcattccccctcaacctcaaaggcaaaggccgttcctactcctct
cccttcccactcgtctccgctctcgatctcgttcccctctcgccctcgctcacgcatagc
gacgtcttcgtgcctttacctctcgccttgactttccccgtcaaggctgtggctgtggag
caggagagcaagccgaggaatgcgtttgaggagaagcctgagaagctgaggagtgcgttc
gaggagatgttgccgcgcgaggtgcggctccacgtttttgcgtgtttggtgcatgggagg
gaggaggaacatgtaaggcggatgggcgagggtaggtggacggtgcataaggcggggtcg
tctaagaatagatgggtggggcgcgagcagggggttagggaactcgttaggatgagtagg
gtgtgcaagtcatggatgggactcgtcttcgacggccagctttggacggaccttgatgtg
cgaccgttcccgaagatgccaccttcgcagataatgcatatcgccaaatccgcaggaccg
ttcatcaagacgctctccctcgcaggccacacctctttcctcccctcctccctgcaaacc
ctcaccgacagcctctctctccgctccaccacagccaacaacacgctcctcacctccgtc
gacctcaccggctgttcatccctaaccacgcccgcactgcaccacctcctccggcgctct
cccctcctaaacgtcctgaaactgcgcgccctgaacgcagtgacgaacgagacctgcgag
atcatctacgagtcgtgcaaagtactcgaagtgctcgacatgagccgctgtaagctcatt
tccggcgccggaatccgatccatggccgcgttcgcgctcagggatcagaaagcgctcaag
ctgagggagttgaggctttcgggtctgaagggtatcacggacgggatgatggagagtctg
gggagggtggcgccaggaatcgaggtgctcgatttgagctactgcaaggatctgcataat
tcctcgatcgaggcgttcacggcctgtccgctcgatatgagcgacatggtggacgtcctg
gacccggagatggagaccgtcgtgttgtcggcgcgcgaggcggggagggaatacgattcg
aacggatacgctgcgaatcggtatcggaggcgggtgacgcggctgaggcatttatcgctt
tcgagttgtgggctgttgacggatatagcgtgttcgcaccttgcgtatgcgatgccgagg
ttggagatgttggagcttggggggataggggcggagatgaaggatgaggggctcgttagg
cttttggagacgcttccggggattaggaaggtggatctggaggatgcgagcgagattacg
gataaggtgcttgaggcgctcacgccttcgaggtctcacggtgaggaagacgatggtgag
gaggagcgggaggaggaaggagaaggcgaaccaggctcgaagctcgaacatctcgtcgtc
tcgtacgccgtccatctgagcaacgaagccttcctagccctcatcaccaactgtcaccac
ctcaaagtcctcgaagcggacagcacccgtctctccggccccacgctcaaaacgttcgtc
aatcgcgctcgggaacgttcaatccgagatgccaccgtcgtcgctatcgactgtcgctcc
gtcggtgagggcgtgttgaaggaactggcgggcgaggataaggtcagggcgaggaagggc
cagcggaagttcgagacgcggaagttggggtatttggacgggagggacgatgaggggctc
ggagtcgggatggatgagtgcgatgagggcagggtggtcgtgaagacgttttattcgtgg
cagagcgtggatgcggtcaccgctgcgagggcgaagaggaagaggacgaggaaggcagct
ttgggagggagagatagagatagagatacggatttggagacggatgcggtgggtgatgag
gagggtgggtcaggtcttgggacggggattgggggaggtgggagtagggggataggggcg
gcgggtttgggggctgggagggcgaggtggtggtcgcctggtggggggaacgggaggttg
aggggctctgctggtggtgcgaatacgccgagcttgttggatttgcataatgagagggat
gggtgtacgattatgtga
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integrated database retrieval system
