Stereum hirsutum: STEHIDRAFT_149113
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Entry
STEHIDRAFT_149113 CDS
T03127
Name
(RefSeq) pectate lyase B
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shs
Stereum hirsutum
Pathway
shs00040
Pentose and glucuronate interconversions
shs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
STEHIDRAFT_149113
Enzymes [BR:
shs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
STEHIDRAFT_149113
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
18799883
NCBI-ProteinID:
XP_007307886
JGI:
Stehi1_149113
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MKCFLSLAVLLAPFQFIAAKPQFVKRASVNDVATLGYASLNGGTTGGSGGATTTVTTLDA
LTSAVAGNAKKVVVISGTITGDDVVKVGSNTTVLGESGALLQGVGLRVLEESNVIIRNIA
ISKVLASAGDAIGIQQASQVWVDHVDLSSDMDHDKDFYDGLLDITHGCTGVTVTNSKLHD
HWKASLIGHSDNNGPQDVAITVTLANNWWTNLNSRTPSLRFGHGHIFNNYFDANNDGINT
RDGAQVLVENNVFEDTKDPLYSTDSGNAVSVNNDFGGGEDTAPQGNFTTAPYTYSLIETD
SVKASVTSTAGANLSF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgctttctctcactcgctgtactcctggctcctttccagttcatcgcggcgaaa
ccgcaattcgtcaagcgtgcctcggtcaacgatgtcgctaccctgggttatgcctctctc
aatggagggaccaccggtggatctggaggagcgacgactaccgtcaccacactcgatgca
ctcacatccgctgtagcgggcaacgcgaagaaggtcgtcgtcatatctggtactatcacc
ggtgatgatgttgtgaaggttggttcgaacacgaccgtcttgggggaatctggcgctttg
ttacagggcgttggactccgtgtcctggaagagtccaacgtcataattcgtaacattgcg
atctcgaaggttctggcctctgctggagacgccatcggcattcagcaagcatcacaggtc
tgggtcgatcatgttgacctgtccagtgacatggatcacgacaaggacttctacgatggt
ctcctagacatcacgcacggctgcacgggcgtcaccgtcaccaactcgaaattgcacgac
cattggaaggcatccctcatcggtcactctgacaataacggaccacaggacgttgccatc
accgtcacgcttgcgaataattggtggacgaacttgaattcgaggacgccatctttgagg
tttggtcatggtcacatcttcaacaactatttcgacgcgaacaatgatgggattaacacc
agagatggcgctcaggtgttagtcgagaacaacgtctttgaggatacgaaagacccgctc
tattcgaccgattccggaaacgctgtctctgtgaacaatgactttggcggtggagaagat
acggcgccgcagggtaactttacgactgctccgtacacctacagtttgattgagacggat
agcgttaaggcttctgttacgagtactgctggtgccaatctttctttctga
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