Stereum hirsutum: STEHIDRAFT_150332
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Entry
STEHIDRAFT_150332 CDS
T03127
Name
(RefSeq) Nucleotidyltransferase
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
shs
Stereum hirsutum
Pathway
shs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
STEHIDRAFT_150332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_150332
Enzymes [BR:
shs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STEHIDRAFT_150332
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
STEHIDRAFT_150332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
Cdd1
IMS_HHH
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
18800036
NCBI-ProteinID:
XP_007310083
JGI:
Stehi1_150332
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MDIQWVQQWAQWPEGRFIYALAESGGAKVVGNVDEAEVVVTAIGMRKRLERHVSWNIAKS
KSLVTPAWLRDSLHKGTPQSCGDYAAIPDLQPSTAANCPTDDSDSGSGSDSDPDPPTMNN
IKESLPSSAPPSRSGHSKPSSARSDIHSSIPASLLPPNPPTAFNPKSLDPLAKFACERPS
PLKCVNQKLAEDLDVMRKWRELDGEERSALSYRKAVSVAYPTKINSTRDIQRLPFVGSKI
SSMIEQFIDQGYISEVRTTLHSARFKTLTVFNSIYGIGPHTARQLYALGLSSLEQLEQYY
DVEGAWDDDDDAEGAGGEGDSEIPASIADAKREKSAKYGHSGGGGLPSPPASEQSEIRQE
SPALLPEEAEAEALTATSKERPKDIKLRGITTMLDEEDVGAMPKEEIKESWIKIALGLRE
DLSVKIPRDEVREIHRVIMGELDELQPGCVSTIVGGYRRGKEESNDVDVVFTHPDPEKAK
GLCKRLMHVLYDKGLVTHVMHLSSFHAHNALRTTHWDSLEKSLTVFVLPGTSPIYPLPSD
HDPSKTRRRRRRVDFIFAQPKTYWTAVVGWTGSMMFERDLRSWAKKRGLKFDSSGITRRR
DSKLIYPRTEKEVFDVLGLPWIDPTMRNADV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggatatccagtgggtccagcaatgggcacaatggcccgaaggccgtttcatatatgct
cttgccgaatcaggcggggcgaaagtggtgggtaacgtggacgaggcggaggtggtcgtc
accgcaatcgggatgaggaagagattggagaggcatgtttcttggaacattgctaaatct
aaatcccttgtcacaccagcttggctgcgtgactctctccacaaaggtactcctcagtcc
tgcggcgactacgccgccatccccgacctccaaccgagcaccgcggccaactgccccacc
gatgactctgactctggctctggctctgactctgaccctgacccgcccaccatgaataat
ataaaggaatctcttccgtcatcagcaccgccaagtcgctccggtcattctaaaccgtcc
tcggcgcgttctgacatccatagcagcatcccggctagtcttctcccgccgaacccaccg
acggcgtttaatcccaaatcattggatcctctggcgaagtttgcgtgtgagaggccgagc
ccattgaaatgtgtaaatcagaagttggcggaggatttggatgtgatgaggaagtggagg
gagctggacggtgaggagaggagcgcgttgagttatcggaaggctgtctccgtggcctat
cctacaaagattaactctacgagagatattcagaggttacccttcgttgggtctaagatc
tcgtccatgatcgaacaattcatcgaccaaggatacatatccgaagtccgcacaacccta
cactccgcacgcttcaagacccttaccgtcttcaactctatctacggtatcggcccacac
acggctcgtcagctgtacgcactcgggctttcgtcgttggagcagctggaacagtattat
gatgtagagggggcttgggatgatgacgatgatgcggagggagcgggaggagagggagat
tctgagatcccggcgagtatagctgatgcgaaacgtgaaaaatcagcaaagtacggtcac
agtggtggcggtgggctaccctcgcctccggcgtctgaacagagcgaaatacggcaggaa
tctccagctctactacccgaagaagcggaagcggaagccttgacggctacttccaaggaa
aggccgaaggatatcaagttgagagggataacgacgatgttggacgaggaagatgtgggt
gcgatgccgaaggaggagatcaaggagagttggataaagatcgcgttggggctgagggag
gacttgagtgtgaagattccgcgcgacgaggtgagagagattcatcgcgtcatcatggga
gagctggacgagttgcagccagggtgtgttagtaccattgttggaggatataggcgcggt
aaagaagagagcaacgacgtcgatgttgtgttcacgcatccggatcctgagaaggcgaag
ggtttgtgtaagcgcttgatgcatgttttgtatgataaaggactcgtaacccacgtcatg
cacctctccagcttccacgcccacaacgccctccgtacgacacactgggactccctcgaa
aaatccctcacggtattcgtcctgcccggcacgtcgcctatttacccgctgccctccgat
cacgacccttctaaaactagaaggaggagaaggagagtagattttatattcgcgcagccg
aagacttattggacggctgtcgttgggtggactggatcgatgatgttcgagcgagatctg
cgcagctgggcgaagaaacgaggcctcaagttcgatagttccggaattacccgccgtcga
gactcgaagctgatctacccgcggacggagaaagaagtgtttgacgtgcttgggttgccg
tggatcgacccgacgatgaggaatgcggacgtttga
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