Stereum hirsutum: STEHIDRAFT_150614
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Entry
STEHIDRAFT_150614 CDS
T03127
Name
(RefSeq) TFP11-domain-containing protein
KO
K13103
tuftelin-interacting protein 11
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_150614
Spliceosome [BR:
shs03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
STEHIDRAFT_150614
Other components
Complex C specific factors
STEHIDRAFT_150614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
18800078
NCBI-ProteinID:
XP_007310555
JGI:
Stehi1_150614
UniProt:
R7RYM7
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MARRKRAFMDDGDSDSSPDSDDGVDQHEHEQDPDERDERELLQNPYGRKHKRMKRDGRED
AVYGVFADDSDEDEGFSKRPTRGGAGGAGARKEKRSDWAKAPAFVSSSTKAPPKADNENG
NEDGAEKGEKVSGSGEGDSESSEEALEADVDMDKPPSPRVREADDDEDDAELEQRPRFGL
GRTAGRGGLGLGAAAAAATTTSKSPASSMSFSGFTKAAPGSSTHPSAIEPTPVPPTTTSS
LPSAFGGAPRVQRAFVRDGNGIKPTANGHSTSRSSTPLPSNVAGSFGARMLSKMGWQAGQ
GLGTTGEGIVNPVESKLRPKNMGIAFKGFTERTKQSKEEARRRGEAVSSDDEDAGGRKGK
KGGKKGAKVTKEGKEEKREDAWKRPKKVKTRIEHKTYEQIVSEAGEETGLSGIGIIIDAT
GATPREVSSIAEVSTASWTPSTDPTRLPEVRYNLRAIVDHSVSEIDRLAREARKGRIRQQ
AIREEDARLKKRVTEEAELIARLQQVHLVVDDIKVQAKELAMMDGATLEPFAPHFEKLLS
QFPQEFDRYRLDSIVVAAIAPVVRRILAYWQPLQEPTLLLSTFRSWRKALRISTPTAAKS
PSSQLDVYGTRTTTTTTTTVQNAETVMTPFESLLWTVWLPHVRSALNNEWDARDPAPAVK
LYESWAEILPAFVKDNILDQLVLPKVKRAVADWSPRKNNNKVPGVGVGVEKATGAGEEVT
LRTLVFPWLGHVGLRMDDILDDAKRKLKSMLRHWRPGEPIPSDLNDWRMLLGAQVWDGLV
VSYVLPKLGAELRDGFVVNPRRQEMEALERVLEWGVSVSPTSSSANGKEGGGKEGPLVRE
SMMGQLLEREFWPKWLDVLHLWLVQGGVRLGEVADWFEWWRGWMDRALAGPGGSGGEKKG
KMMEAVEEGFRKGLKMMDEAYRLGDEGRANLTKPDHHRSSSTTAAQQQAQVAAAAAKKKA
IRAGSQQPPEVTFKSIVEDYAAKHNLMVIPTGRAHEISRMPLYRVSATADGKGGLVVYVF
EDAVYAPDPNAGAGGGEFRAVSLENMVLRAMKGGGGIGTG
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtcgcaaacgcgcgttcatggacgacggcgattcagactcttctcccgactcc
gacgacggcgtcgatcaacacgaacacgagcaggatccggacgaacgcgacgagcgcgaa
cttttacagaatccgtacggacgcaagcataagcgcatgaagcgggacggcagggaggat
gccgtctacggcgtctttgcggacgatagtgacgaggacgaggggtttagtaagcggccg
acgaggggaggggcaggcggagcaggggcgaggaaagagaagaggagcgactgggcaaag
gcgccggcgttcgtgagctcgagcacaaaggcgccaccgaaggcggacaacgagaacggg
aacgaggacggggcggagaagggagagaaggtgagtgggagcggggagggggacagtgag
tcttcggaggaggcgctggaggcggacgtggacatggacaagccaccgtcgccgcgcgtg
cgagaagcggatgacgacgaggacgacgcagaattagaacagaggccgaggtttggcttg
ggtcggacggccgggagaggcggtctagggctcggtgctgctgccgccgccgccacaacc
accagcaagtcgcctgcttcctccatgtctttttcgggcttcacgaaagccgcccctggc
tcttccactcacccctccgccatcgaacctactccggtgccaccgactactacttccagt
ttgccgtccgcttttggaggcgctccccgcgttcagcgtgctttcgtgcgcgatggcaat
ggtatcaaacccacggccaatggccattccacttctcgatcctccacccctctaccatct
aatgtcgctggctcctttggtgcccgcatgctctccaagatggggtggcaggccggtcag
ggtctaggtacaactggagagggtatcgtcaaccccgtcgagtcgaagcttcgaccgaag
aatatgggtatcgccttcaaaggcttcacagagcggacgaagcagagtaaggaagaggcc
aggaggaggggtgaagctgttagtagtgacgatgaggacgcgggtggacggaagggcaag
aagggtgggaagaagggtgctaaggtcacgaaggagggcaaggaggagaagagggaggat
gcttggaagagaccgaagaaggtgaagacaaggatcgagcataagacttatgaacagatc
gtctccgaggctggagaggagactgggctgtcgggcattgggatcatcatcgatgcgacg
ggcgcaacgcccagagaagtctcgtccatagcagaagtctcgacggcttcctggacgcct
tcgactgaccctacacgtctgccggaggtacgatacaatttacgggccatcgtcgaccac
agcgtgagcgagatagatagactcgcgcgcgaggctaggaagggtcgaatacgacagcag
gctatccgcgaagaggatgcgaggctgaagaagagggtcaccgaggaagccgagctgatc
gcccggctacaacaagtccacctcgtcgtggatgacatcaaagtacaggcgaaagagctc
gcgatgatggacggggcgacattggagcccttcgcgccacatttcgagaaactcttatcg
cagttcccacaagagtttgaccgataccggttggattcgatcgtcgtcgctgccatcgcc
cccgtcgtccgacgaatactcgcgtattggcaaccactacaagaacccaccctcctcctc
tccacattccgttcctggcgaaaagcactccgtatctccacccccaccgcagccaaatcg
ccttcatcccagctcgacgtctatggcacccgaaccaccaccaccacaacgacgacagtg
cagaatgcggaaacggtcatgacgccgttcgagtcgttactgtggacggtgtggctcccg
cacgtccggtccgcattgaacaatgagtgggacgcacgggaccctgcgccggctgtgaag
ctgtacgagtcctgggcggagatcttgccggcgttcgttaaggataatattcttgatcaa
cttgtactaccgaaagtgaagcgtgcggtggcggattggagtcccaggaagaacaacaac
aaggtacctggcgtcggtgtgggtgtggagaaggccacaggagcaggagaggaggttaca
ctgaggacactcgtcttcccctggctaggccacgtcggcctccgtatggacgacatcctc
gacgacgcgaaacggaaactgaaatcgatgctgagacactggcgcccgggcgaaccgatc
ccgtccgatctgaacgactggaggatgttgttgggcgcacaggtgtgggatggactggtc
gtgagttatgtgttgccgaagttgggggcggagttgagggatgggtttgtggtgaatccg
aggaggcaggagatggaggcgttggagagggtgttggagtggggtgttagtgttagcccg
acgagttcgagtgcgaatgggaaggagggaggagggaaggaggggccgttggtgagggag
agtatgatggggcagttgttggagagggagttttggccgaagtggttggacgtgttgcat
ctttggttggtccagggcggcgtgcggcttggcgaggtggcggattggttcgagtggtgg
agggggtggatggatcgggcgttggctggccccggtggaagtggaggtgagaagaagggg
aagatgatggaggctgtggaagaaggatttaggaagggactgaagatgatggatgaggcg
tatagactgggcgacgagggccgagcgaacttgacgaaaccggaccatcaccggtcttct
tcgacgaccgctgcacaacagcaggcacaagtagccgcggcagcagcgaagaagaaggcc
atcagggcggggtcacagcagcctccagaagtgacattcaagtcgatagtggaggattat
gcggcgaaacataatctgatggtgatccccaccggtcgtgcgcacgagatctcgaggatg
ccgctttatagggtcagcgcgacggcggatgggaagggcgggctggtggtgtatgtgttt
gaggatgcggtttatgcgccggatccgaatgcgggtgcgggtggtggggagtttagggcg
gtttcgttggagaatatggtgttgagggcgatgaaggggggtggcgggattgggacgggt
tag
DBGET
integrated database retrieval system
