Stereum hirsutum: STEHIDRAFT_151659
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Entry
STEHIDRAFT_151659 CDS
T03127
Name
(RefSeq) WD40 repeat-like protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
shs
Stereum hirsutum
Pathway
shs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
STEHIDRAFT_151659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shs03009
]
STEHIDRAFT_151659
Ribosome biogenesis [BR:
shs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
STEHIDRAFT_151659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
WD40_WDHD1_1st
WD40
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT80_2nd
Beta-prop_Vps41
Beta-prop_EMC1_N
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
18800250
NCBI-ProteinID:
XP_007298793
JGI:
Stehi1_151659
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MSSATPKSKKGKTAPPRGRPTSSSVLSQPVVEDASSLTALSTFSPKGNYFVLLSLAIDKH
RLRVHDTATGQSIAEHIVQDARVATLSWTELGSSEHQEEPMEEDDAPKKKRKKRNSLATQ
ASSTNASETSQVVLLGLSNGSLLVFSPSHGRVLRTLSHSSSTAAILSLSVSQDASSIWTS
SADSSVHVWNAHSGEHLSSWKTDDRIPCTSLSMCKSNSNDQVDFLLAHHSIRLLSSASPS
SPSGSSKPKELATFTGHASNITSIHWVEGSIPKRFVSMAEADRHVYVWEVPEASTTEGKL
VASIPLDSDARQISVNGRHLLVLSASGKISVFELDSEFSSSSPTKKSKQKVLTLSPRSTV
FTKAKRGTTPVEIASAAAVHGQEGHVRMARLIGGVRPVFDVVEYLDQFGNFIPEVIVMKD
VYSGLVDSADVALGPSTKRYAESSNLAVRSGVELGQEPSTDDLALRDIDGALDVDIAELS
LGQRLTALDPGTPATRRTAADADSDSSVEDNAAPNGRNSHRRQQTQDDSTATPAMSSITL
TRTLIQALHSSDSKLLEMCLSHSDSGLIMHTVRRLPPQLAVPLVVACVERLGRGKRAGSG
KGGGAGASSQRGMGLVRWVKTVLVVHSGHLMTMPDLVARLSGLHATLTTRLTLQDSLLSL
SGRLEMVLQQIELRSSAAPAPISQPPQSSKAGKKKGGKANGIVAREPVRYVEGESEDEDE
DAGAMDMEVEEGSEAGSIEDVELGGESASEDGSDEEQDEEDEELDDDDEDDEDDDEEGAP
KLNGFVDDEAEEDEDSEEESE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagcaactcctaaatcaaaaaagggcaagactgcacctcctcgcggccgtccc
acctcttcttccgtcctctctcaacccgtagtcgaagatgcatcctcattaactgcactc
tccaccttctcgcccaaaggcaattactttgtccttctatccttggcaatagacaagcat
cgtctacgtgtacatgatactgctacaggacagagcatagcggaacacatcgtccaggac
gcacgagttgccacactttcgtggactgagctcggttcttcggaacatcaggaagaacct
atggaggaagacgacgcaccgaagaaaaaacgtaaaaagcggaatagtctcgctacccag
gcgagttcgacaaatgcctctgagacttcgcaggtcgtacttctgggtctctcgaacggc
tcgctacttgtcttctctccttcccatggtcgcgtcctccgtaccctgtcacattcgtcc
agcaccgccgctatcctctccctttctgtctcacaagacgcatcaagcatctggacttcc
agcgcagacagctccgttcacgtctggaacgcacacagtggcgagcatctctcatcgtgg
aagacagacgaccggataccatgcacgtccctcagcatgtgtaaatcgaattctaacgat
caagtcgacttccttctggcccatcatagtatccgcctcctttcctccgcctctccctct
tctccttcaggttcatcaaaaccgaaggagctggccacttttacaggacatgcctcaaat
atcacctctatacattgggtcgaagggtctataccaaaacgattcgtctccatggctgag
gccgaccgtcatgtttatgtctgggaggtcccagaagcgtctaccacggagggaaaattg
gtcgcttctataccgctggactcggatgcgcgacaaatatcagtaaacggacgacatctt
ctcgttctctccgcgtcggggaagatcagtgtgttcgaactcgattcggagttctcctcg
agctctcctacgaagaagtccaaacaaaaggttcttactctcagtcctcgttcgaccgtc
ttcaccaaggccaaacgtggaacaacacctgtagagattgcatcggcggctgctgttcat
ggacaggaggggcacgtacgtatggcgcggttgataggcggcgtacgaccagtatttgac
gttgttgaatatctcgatcagtttggaaacttcattccagaggtcatcgttatgaaggac
gtatactctggcctggttgatagtgctgatgttgcacttgggccttcgacgaagcgttac
gctgagtcttcgaacctcgctgtccgatcaggtgtcgaactcggccaagaaccctcgaca
gacgacctcgcgctccgtgacattgacggcgccctcgatgtcgatattgctgaactcagc
ctaggacaacgtcttaccgctttagaccctggcactcccgccactcgtcgcaccgctgcc
gatgcggactctgactcgtcagtcgaagacaacgctgctcccaatggtcgtaattcccat
cgtcggcagcagacgcaagacgattccactgccacaccagccatgtcttccatcacgctc
actcgcactctcatccaagctcttcactcatcggactcgaaactactcgagatgtgtctg
tcacattcggattctgggttgatcatgcatacagtaagaagattgccgccacagctggct
gttccgcttgtagtggcgtgtgttgagagactggggaggggaaagagggcgggaagcggc
aagggtggtggggcgggagcgagtagtcagaggggaatgggtttggtgagatgggttaag
acggtgttagttgtgcacagtggacatctgatgaccatgcccgatttggtcgcacggtta
tctggtcttcatgccacactcaccacacgactgacacttcaagattctctgctctcgctg
tctggacggcttgagatggttctacagcagatcgagctccgatcttccgctgcgcctgct
ccaatatctcaaccgccgcagtcatcaaaagcgggtaagaagaagggagggaaggcgaat
ggcatcgttgcgagagaacccgtgaggtacgtggagggtgagagtgaagatgaagatgag
gacgctggagcgatggatatggaggtcgaggaaggaagcgaagctgggagtattgaagac
gtggaattgggcggggaaagcgccagtgaggatgggagcgatgaagaacaggatgaagag
gacgaagaacttgatgacgacgatgaggatgacgaggacgatgacgaggaaggtgccccg
aaattaaacggtttcgtagatgacgaggcagaggaagacgaggacagcgaggaagagagc
gaatga
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