Stereum hirsutum: STEHIDRAFT_165069
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Entry
STEHIDRAFT_165069 CDS
T03127
Name
(RefSeq) WD40 repeat-like protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
shs
Stereum hirsutum
Pathway
shs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
STEHIDRAFT_165069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shs03009
]
STEHIDRAFT_165069
Ribosome biogenesis [BR:
shs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
STEHIDRAFT_165069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Utp13
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_IFT140_2nd
Beta-prop_ACSF4
Beta-prop_HPS5
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
18802728
NCBI-ProteinID:
XP_007299135
JGI:
Stehi1_165069
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MAFQSSRGKLKTAFKKGRVIAPLYTGGAVSASHDGRMLVTCVGEEAILTDIEQGIQIARF
TGDGESITSLCISPSDLTLVIFTSSMSLRIYDLPKTTSDPSKAINPKRVVTRAHDAPVHV
CTFDPTSTYLASGSADGIVKVWDVSRGFTTHVLRGHGGVVSALKFSYPISAGSVEEREMK
LVTASVDTKVRVWNLSKTAAEMKKGKQVKPEHVLEGHVSVPRGVDVSSDGRWLVSGGRDA
VVLVWDLAAAVKKGSKGKEKASSEPVLVKTVTTVERVEACGLLSEDAEVAGEESGKGSIR
FFTAGEKGMVKVWNGKTGKELARFGEDTAPVASSSAGNAEEQEEQRQVVDAIYIADANTV
ISIHADQNILYHSLSSSTVSRQLVGFNDEIIDAAFLHSPSSAPSPSTSHDTHIVLATNSS
LIRLYSSHTLDARLLSGHADIVLCLSTSPGREVFASGGKDRTARIWAPRSSSSTAPDGWG
WECVAICEGHAESVGALSFSRQGPASDEEAPKLKFMFTASQDRTIKMWDLSSVATSATST
QSPTKCKSLCTQKAHDKDINALDVSPNDLLVASGSQDRTAKVFSIVYSSSSSAGARGELK
LLGTCKGHKRGVWSVRFAKGERVLATGSGDRTIRLWGLEDFSCLRVLEGHSNSVLRVDWL
SPPAEGRTHGQGPEQLVSSASDGLVKVWDTRQEECVATLDGHEDKVWALAISSDNRRIVS
GAADSVVTFWEDCTQEVEEAREKEREEGVLKEQELQNYVAVNDYHRAITLALSLAHPGRL
YNLFKVLSSDENNEGDGSILGSQAVDEVIRTLHYSELAKLLKYVRDWNAKASSSAVAQRV
LHAIVKLRSPEEVIKALAPSTFDNAIVDVDDAAVDGSAVAKGAKKVQGVDGKEVVEGLIA
YTERHLKRMERLVQESYVLDFIVGEMDDGLLDDGVDVMDVDSDSDSS
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggctttccaatcgtctcgtggaaagctgaaaaccgctttcaaaaaaggccgagtaatc
gctccattatacaccggtggcgccgtctcagccagtcatgacggtcgcatgctagtgact
tgtgtgggggaggaggctattctgaccgatattgaacaagggatacaaattgcacggttt
actggcgacggcgaatccatcacttcattatgtatatcaccctccgacctcactctcgtc
attttcacctcttccatgtccctccgcatatacgacctccccaaaacgacctccgatccc
tcgaaagccatcaacccaaaacgtgtggtcactcgcgcacacgacgcaccagttcacgtc
tgcacctttgacccaacctccacctacctcgcctcaggatctgcagacggaatcgtcaaa
gtctgggatgtttcccgaggattcacgacccatgtccttcggggccacggtggcgtcgtc
tctgctctgaaattttcgtatcccatctccgcagggtccgtggaggagagagagatgaag
ctggtgaccgcctccgtggatacgaaggtcagggtgtggaaccttagtaagacggcagcg
gagatgaagaaggggaaacaggtgaagccagagcacgttttagagggacatgtgagcgtg
ccgaggggtgtggacgtgagttcggacgggagatggttggtttctggtggcagagatgct
gtggtccttgtttgggatctcgctgcggccgtgaagaaggggagtaaggggaaggagaaa
gcatcatctgagccggtgttggtcaagacggtcactaccgtggagagggtcgaggcatgc
gggcttttgtcagaggatgctgaagtcgcgggagaggaaagtggtaaaggcagcatcaga
ttctttaccgccggcgagaaaggtatggtgaaggtgtggaatggtaaaaccggcaaagaa
ctggcgaggttcggggaggacactgctccagtggcttcgtcctcggctggcaatgccgaa
gaacaggaggaacaaagacaggtcgtggatgctatatacatcgccgacgcgaacactgtc
atttccatacacgccgaccagaatattctgtaccactcactatcatcttcgacggtctcc
cgccagctcgtcggcttcaacgacgagatcatcgatgccgcattccttcattcgccttca
tctgcgccatcgccatcgacctcccacgacacacacatcgttctcgcgactaactcttcc
ctcatccgtctttactcttcccacactctcgacgcacgcctcctctctggccacgccgac
atcgtcctttgcctgtccacttctcccggccgagaagtcttcgccagcggaggcaaggac
cgtaccgcacgaatatgggctccccgttcatcttcctcaacggctcctgacggctggggt
tgggagtgtgtagctatatgcgaaggccatgctgagtccgttggtgcgctgtcattctcc
cgacaaggaccagcctcggacgaagaggccccgaaactgaaattcatgttcacggcctcc
caggatcgaacgatcaaaatgtgggacctttcttccgtcgccacctcggccacttctact
caatcgcccacaaaatgcaaaagcctgtgtacccaaaaggcacacgataaggacatcaac
gctttggatgtttcgcccaacgatctgctcgtcgcttccggctcccaggatcgtacagcc
aaagttttctctatcgtttactcgtcgtcgtcatcggctggtgcccgaggcgagctcaag
cttcttgggacgtgcaaagggcacaaacgtggcgtatggagcgttcggtttgctaagggg
gagagggtattggccacgggcagtggcgatcggactatcaggctatggggtctagaggac
ttcagttgtttgagggttttggaaggtcacagcaactccgtgcttcgtgtcgactggctg
tcgccgcctgcagaaggtcgtactcatggacagggcccagaacaacttgtgagcagcgct
tccgacggcttggtcaaggtatgggatacacgacaggaagaatgtgtggcgacgttggat
gggcatgaagacaaggtttgggcactggctatcagctctgataatcgcagaatcgtctcg
ggtgctgcggactctgtcgtcacattctgggaggactgcacccaggaagtagaggaggca
cgagagaaggagcgagaagagggcgttctgaaggaacaagaactgcagaactacgttgct
gtgaacgattatcatcgggccatcaccctcgctctttcgctcgcgcatcccggaaggctg
tacaacctcttcaaggtcctttcttccgatgaaaataatgaaggcgatgggtccatttta
ggctcacaggctgtagacgaggtgatccgaacactccactattccgagctggccaagctc
ctcaaatacgtccgggactggaatgcgaaagccagtagctcggctgttgcccaaagagtc
ctgcacgccatcgtgaaacttcgttccccggaggaagttatcaaagcattggcaccatcg
acctttgataacgcaatcgtcgacgttgatgacgctgctgtcgatgggtcagccgtggcg
aaaggcgcgaagaaggtgcagggcgtcgatgggaaggaagtggtggagggtttgatcgcg
tacacggagcggcatctgaagaggatggagcggttagtgcaggagagctatgtgttggat
ttcattgttggggagatggatgatgggcttttggacgatggcgtggacgtcatggacgtc
gattcagattcagactcgtcataa
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integrated database retrieval system