KEGG   Stereum hirsutum: STEHIDRAFT_165069
Entry
STEHIDRAFT_165069 CDS       T03127                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
shs  Stereum hirsutum
Pathway
shs03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    STEHIDRAFT_165069
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:shs03009]
    STEHIDRAFT_165069
Ribosome biogenesis [BR:shs03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    STEHIDRAFT_165069
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz Utp13 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_Nup120_160 WD_LRWD1 Beta-prop_IFT140_2nd Beta-prop_ACSF4 Beta-prop_HPS5 Cytochrom_D1
Other DBs
NCBI-GeneID: 18802728
NCBI-ProteinID: XP_007299135
JGI: Stehi1_165069
LinkDB
Position
Unknown
AA seq 947 aa
MAFQSSRGKLKTAFKKGRVIAPLYTGGAVSASHDGRMLVTCVGEEAILTDIEQGIQIARF
TGDGESITSLCISPSDLTLVIFTSSMSLRIYDLPKTTSDPSKAINPKRVVTRAHDAPVHV
CTFDPTSTYLASGSADGIVKVWDVSRGFTTHVLRGHGGVVSALKFSYPISAGSVEEREMK
LVTASVDTKVRVWNLSKTAAEMKKGKQVKPEHVLEGHVSVPRGVDVSSDGRWLVSGGRDA
VVLVWDLAAAVKKGSKGKEKASSEPVLVKTVTTVERVEACGLLSEDAEVAGEESGKGSIR
FFTAGEKGMVKVWNGKTGKELARFGEDTAPVASSSAGNAEEQEEQRQVVDAIYIADANTV
ISIHADQNILYHSLSSSTVSRQLVGFNDEIIDAAFLHSPSSAPSPSTSHDTHIVLATNSS
LIRLYSSHTLDARLLSGHADIVLCLSTSPGREVFASGGKDRTARIWAPRSSSSTAPDGWG
WECVAICEGHAESVGALSFSRQGPASDEEAPKLKFMFTASQDRTIKMWDLSSVATSATST
QSPTKCKSLCTQKAHDKDINALDVSPNDLLVASGSQDRTAKVFSIVYSSSSSAGARGELK
LLGTCKGHKRGVWSVRFAKGERVLATGSGDRTIRLWGLEDFSCLRVLEGHSNSVLRVDWL
SPPAEGRTHGQGPEQLVSSASDGLVKVWDTRQEECVATLDGHEDKVWALAISSDNRRIVS
GAADSVVTFWEDCTQEVEEAREKEREEGVLKEQELQNYVAVNDYHRAITLALSLAHPGRL
YNLFKVLSSDENNEGDGSILGSQAVDEVIRTLHYSELAKLLKYVRDWNAKASSSAVAQRV
LHAIVKLRSPEEVIKALAPSTFDNAIVDVDDAAVDGSAVAKGAKKVQGVDGKEVVEGLIA
YTERHLKRMERLVQESYVLDFIVGEMDDGLLDDGVDVMDVDSDSDSS
NT seq 2844 nt   +upstreamnt  +downstreamnt
atggctttccaatcgtctcgtggaaagctgaaaaccgctttcaaaaaaggccgagtaatc
gctccattatacaccggtggcgccgtctcagccagtcatgacggtcgcatgctagtgact
tgtgtgggggaggaggctattctgaccgatattgaacaagggatacaaattgcacggttt
actggcgacggcgaatccatcacttcattatgtatatcaccctccgacctcactctcgtc
attttcacctcttccatgtccctccgcatatacgacctccccaaaacgacctccgatccc
tcgaaagccatcaacccaaaacgtgtggtcactcgcgcacacgacgcaccagttcacgtc
tgcacctttgacccaacctccacctacctcgcctcaggatctgcagacggaatcgtcaaa
gtctgggatgtttcccgaggattcacgacccatgtccttcggggccacggtggcgtcgtc
tctgctctgaaattttcgtatcccatctccgcagggtccgtggaggagagagagatgaag
ctggtgaccgcctccgtggatacgaaggtcagggtgtggaaccttagtaagacggcagcg
gagatgaagaaggggaaacaggtgaagccagagcacgttttagagggacatgtgagcgtg
ccgaggggtgtggacgtgagttcggacgggagatggttggtttctggtggcagagatgct
gtggtccttgtttgggatctcgctgcggccgtgaagaaggggagtaaggggaaggagaaa
gcatcatctgagccggtgttggtcaagacggtcactaccgtggagagggtcgaggcatgc
gggcttttgtcagaggatgctgaagtcgcgggagaggaaagtggtaaaggcagcatcaga
ttctttaccgccggcgagaaaggtatggtgaaggtgtggaatggtaaaaccggcaaagaa
ctggcgaggttcggggaggacactgctccagtggcttcgtcctcggctggcaatgccgaa
gaacaggaggaacaaagacaggtcgtggatgctatatacatcgccgacgcgaacactgtc
atttccatacacgccgaccagaatattctgtaccactcactatcatcttcgacggtctcc
cgccagctcgtcggcttcaacgacgagatcatcgatgccgcattccttcattcgccttca
tctgcgccatcgccatcgacctcccacgacacacacatcgttctcgcgactaactcttcc
ctcatccgtctttactcttcccacactctcgacgcacgcctcctctctggccacgccgac
atcgtcctttgcctgtccacttctcccggccgagaagtcttcgccagcggaggcaaggac
cgtaccgcacgaatatgggctccccgttcatcttcctcaacggctcctgacggctggggt
tgggagtgtgtagctatatgcgaaggccatgctgagtccgttggtgcgctgtcattctcc
cgacaaggaccagcctcggacgaagaggccccgaaactgaaattcatgttcacggcctcc
caggatcgaacgatcaaaatgtgggacctttcttccgtcgccacctcggccacttctact
caatcgcccacaaaatgcaaaagcctgtgtacccaaaaggcacacgataaggacatcaac
gctttggatgtttcgcccaacgatctgctcgtcgcttccggctcccaggatcgtacagcc
aaagttttctctatcgtttactcgtcgtcgtcatcggctggtgcccgaggcgagctcaag
cttcttgggacgtgcaaagggcacaaacgtggcgtatggagcgttcggtttgctaagggg
gagagggtattggccacgggcagtggcgatcggactatcaggctatggggtctagaggac
ttcagttgtttgagggttttggaaggtcacagcaactccgtgcttcgtgtcgactggctg
tcgccgcctgcagaaggtcgtactcatggacagggcccagaacaacttgtgagcagcgct
tccgacggcttggtcaaggtatgggatacacgacaggaagaatgtgtggcgacgttggat
gggcatgaagacaaggtttgggcactggctatcagctctgataatcgcagaatcgtctcg
ggtgctgcggactctgtcgtcacattctgggaggactgcacccaggaagtagaggaggca
cgagagaaggagcgagaagagggcgttctgaaggaacaagaactgcagaactacgttgct
gtgaacgattatcatcgggccatcaccctcgctctttcgctcgcgcatcccggaaggctg
tacaacctcttcaaggtcctttcttccgatgaaaataatgaaggcgatgggtccatttta
ggctcacaggctgtagacgaggtgatccgaacactccactattccgagctggccaagctc
ctcaaatacgtccgggactggaatgcgaaagccagtagctcggctgttgcccaaagagtc
ctgcacgccatcgtgaaacttcgttccccggaggaagttatcaaagcattggcaccatcg
acctttgataacgcaatcgtcgacgttgatgacgctgctgtcgatgggtcagccgtggcg
aaaggcgcgaagaaggtgcagggcgtcgatgggaaggaagtggtggagggtttgatcgcg
tacacggagcggcatctgaagaggatggagcggttagtgcaggagagctatgtgttggat
ttcattgttggggagatggatgatgggcttttggacgatggcgtggacgtcatggacgtc
gattcagattcagactcgtcataa

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