KEGG   Stereum hirsutum: STEHIDRAFT_165427
Entry
STEHIDRAFT_165427 CDS       T03127                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14962  COMPASS component SWD2
Organism
shs  Stereum hirsutum
Pathway
shs03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    STEHIDRAFT_165427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shs03019]
    STEHIDRAFT_165427
   03036 Chromosome and associated proteins [BR:shs03036]
    STEHIDRAFT_165427
Messenger RNA biogenesis [BR:shs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     STEHIDRAFT_165427
Chromosome and associated proteins [BR:shs03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     STEHIDRAFT_165427
    COMPASS/SET1 complex (yeast)
     STEHIDRAFT_165427
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 18802792
NCBI-ProteinID: XP_007299837
JGI: Stehi1_165427
LinkDB
Position
Unknown
AA seq 397 aa
MAPTDTGPIHSLTLTPSLMGKLKPAKIFKTAVDPGPLPAAGSRPRENTGPRHITGISFDD
KGGHIITAGDDETFRLYSCKTAKHLKTLYSKKYGVDLPRFTHSDRNIIHASTKEDDTIRY
HALHDNKYLSYFKGHTQKVISLEVSPIDDGFMSSAMDNTVRLWDLRTPTCRGLLNLPAAP
IVAYDSTGVVFAVAVNRYSRILLYDQANFDKAPFLTITLEDPTLALISFPPRAIYITSMS
FSTNGKYLLVGCSGDAHYVMDAFEGHLLAKLVGHASLERRRPEVPLGIEPQRGCSGEEVC
WTPDSNYIVGGGLDGRICIWDVQDLGEKTGPIDLKATPRRLQPLTKMDGHPGPARCVKFN
PRLAMMASAGAELAFWLPDQSPDSDDIAKDLVKKLAG
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggcaccgacggatactgggcccatccattctctaactctgacgccctccctcatggga
aagctaaaaccggccaagatattcaagacagcagtcgatccaggtccgcttccagcagct
ggcagccgccctagggaaaatactggcccgcgacacatcacaggcatatcgttcgacgac
aagggcggccatatcatcacggcaggcgatgatgaaacgtttcgactgtacagctgcaag
accgcaaagcacctgaagaccctttactcgaaaaagtacggtgtcgaccttccacggttc
actcacagcgacaggaacatcattcatgcgtccaccaaggaggatgacaccattaggtac
catgctctacacgacaacaaatatctgtcgtatttcaagggccacactcagaaggttatc
tccctagaggtatctcctattgacgatggcttcatgtcctcagccatggacaacactgtt
cgtctctgggatctccgtactccgacctgtcgcggtcttctcaacctccccgctgctccc
atcgtagcctacgatagcaccggggtcgttttcgctgtcgccgtcaatcgttactctcga
atcctgctctatgatcaggccaactttgacaaagctcctttcctgaccatcaccctcgag
gatccgacattagcccttatctcctttccaccgcgcgccatctacataacatccatgtcc
ttttccacgaacggcaagtacctccttgtcggctgttcgggcgatgcgcactatgtcatg
gacgcgtttgaaggccatctacttgccaaactagtgggacatgccagtttagagaggaga
cgaccagaggtgccactgggcatcgagcctcaacgaggctgcagcggggaggaggtgtgc
tggacaccagatagcaactatattgtcggaggcggactggatgggcgcatttgtatatgg
gacgtgcaggatctgggggagaaaacaggacctatcgatttgaaggctacgccgaggcgc
ctgcaacctctgacgaaaatggatggccatcccggtccagcacgatgtgtcaagttcaac
cctcggcttgcaatgatggcctcagcgggagcggaacttgcgttctggctgccagatcag
tctccagacagcgacgacattgcaaaggacttggtgaaaaagttggctggttaa

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