Stereum hirsutum: STEHIDRAFT_167806
Help
Entry
STEHIDRAFT_167806 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
shs
Stereum hirsutum
Pathway
shs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
STEHIDRAFT_167806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_167806
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
STEHIDRAFT_167806
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
CENP-Q
CC_Bre1
Nuf2_DHR10-like
FKBP15
Motif
Other DBs
NCBI-GeneID:
18803211
NCBI-ProteinID:
XP_007303102
JGI:
Stehi1_167806
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MSAFGNFGQNANNTNNNANNAQPAPTGGAFSNLGSNPAPGSAFGGGSLFGQQNPPAAGVS
LFGPGANAGANTAAAPAPASGGLFGGGSNAAAPAAGGSLFGGGGGANPPTPGGSLFGGNT
NTTNNAAPAPATGSLFGGGNTANNAPKPGSLFGGGAATGSGQPTGSLFGGNAGAAAGSTG
AAAGGNTGAGAPATGSLFSGGLFGAKPADSNAAPSAPKPPGSLFGAPLTANTNTPGTSAP
ATGAQPSLLSRLGGDAPAPSTSPAPAQGGLLGGSLFGTKKPDTPAATTPAAGTSAGGFTL
GGAKPSTPTPGGSLFGNTANTTGTPATGSLFGNKDGATTPGGTTANKDAAAPAAGLNLFG
AATANKPEEKKTTTASPFNLFGGGNTGAASTATSTEKKDGATSTAATTVTAPAVSVAPPS
MLRGKSIEEIVNRWSSELETHVREFTKYSTEVAVWDRALYENGNNLAALSAHVLAAEREQ
NDIDQSLDHIEQQQRDLGATLEEYEKQAEEILGRQGGSLRSLDTGPADSERDKNYMLATE
LHSHLDDLSSSLTQLIDSVNAVSLSAIPPSSSDAAKSNEDSMAGIAQVLSNHLESLNWIN
TSSKELEAKVGEVESRVRDAGISVNGNVGQGATLGSGTGGYSGRSRGFGVNR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgttcggtaatttcggccaaaatgcgaacaacacgaacaataacgcaaacaat
gctcaacctgccccgacgggcggtgctttctcaaatctaggttctaatcccgcgccaggc
agcgcgtttggcggtggaagtctgtttggtcaacaaaacccaccagcggcaggagttagt
ttgtttggccctggcgcaaatgcaggagcaaacacagcagcagccccagcacctgcaagt
ggtgggctatttggtggggggagcaatgctgcagcgcctgctgcaggtggcagtcttttc
ggcggaggtggtggcgccaatcctccaacccctggtggtagtctcttcggcggaaacacc
aacacgacaaacaacgcagcacccgcaccggccactgggtctctatttggcggtggaaat
actgcgaacaacgcgcctaagcctggcagcctgtttggcggaggagctgcaacaggaagt
gggcaaccaaccgggtctttgtttggcggaaatgcaggggcggcggcaggtagtacaggg
gctgcagcgggaggaaatacaggggctggggctcccgctacaggcagtttgttcagtgga
ggcctctttggagcgaaacctgcagattcaaatgctgctccaagtgcgcccaaaccgccg
ggatcactcttcggtgcacctttaacagccaacacgaatacccccggcacatctgctccg
gccactggggcacaaccgtcacttctttcccggctcggtggcgatgcgccagcgcctagc
acctcgccggctcctgcacaaggtggcctacttggaggtagtctgtttggcacaaaaaag
cctgatactcctgccgccaccacaccagcagccgggacttccgctggtggtttcaccttg
ggtggtgccaaaccgtctacacctactcccggaggtagtctatttggtaataccgcgaat
acaactggtacccctgcgacaggtagcttgtttggaaacaaggacggggccactacacca
ggtggaaccactgcaaacaaggatgccgccgccccagctgccggcctcaatctttttggg
gctgcaaccgcgaacaagccagaagaaaagaaaacgacgactgcatcaccattcaacctc
ttcggtggtgggaacaccggagctgcttcgacagcaacttcaacagagaagaaggatggt
gccacatcaacggccgcaacgacagtaacggcgcccgcggtctccgtagcacctccgtcg
atgcttcgagggaaaagtatcgaggaaattgtgaaccgatggtcttctgagctcgagacg
catgtgcgcgagttcacgaagtactcaacagaagtggctgtctgggatcgagccctgtat
gagaacgggaacaacctcgctgccctgtctgcacacgtgctggctgccgaacgggaacaa
aatgatattgaccagtccttggatcatatcgaacagcagcaacgggacctcggtgctacg
ctagaagaatacgagaagcaggcggaagagattctggggaggcaaggtggatcgttgagg
tcgctcgatactggccctgcggattccgagagggacaagaactacatgctcgcgaccgaa
cttcacagtcaccttgacgacctttcatcctcactcactcaactcatcgactccgtcaat
gccgtctcactttctgccatccctccctcatcttcagacgccgcaaaatccaacgaagac
tcgatggcaggtattgctcaggttttgagcaaccacttggagagcttaaactggatcaac
acgtcctcaaaggagctggaggccaaggttggagaggtagagagcagggtaagagatgcg
ggtattagtgtcaatggcaatgtgggtcaaggggctaccttggggtcggggacaggtgga
tatagtgggaggtcgaggggattcggggtgaatcggtga
DBGET
integrated database retrieval system
