Stereum hirsutum: STEHIDRAFT_169489
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Entry
STEHIDRAFT_169489 CDS
T03127
Name
(RefSeq) RNA-binding domain-containing protein
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
shs
Stereum hirsutum
Pathway
shs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
STEHIDRAFT_169489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_169489
Spliceosome [BR:
shs03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
STEHIDRAFT_169489
Complex B
STEHIDRAFT_169489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
18803522
NCBI-ProteinID:
XP_007305623
JGI:
Stehi1_169489
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MASSSTVTQPNTTLYLNNLNDQIQKEELRGQLFALFTTYGKVIDVVATKTQKMRGQAFLV
FTDLAAATSALRATDGMLFYDKPLRVQYAKTKSYATMRREDPNFVPPTAAHGRPLTDSQV
KPIGGAGSSVQKRTREDEDMEDGRAQKQKKAAAAEEESDDEEMEIDDDEDGPPAQQGGEQ
AATGAATTIPQTAGRSSARLLCTNLPGEVTDSVLSVLFQQYQGFQSTQVAPAPTATANAA
GQKGKMAQVVFDTPELASVAKEALDGFTLKKGWKMTVAFV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctccaccgtcacacagcccaacacaacgctctacctaaacaacctcaac
gaccagatccagaaggaagagctgcgtggccagctcttcgcgctattcaccacatacggc
aaggtcatcgatgtcgtcgcaaccaagacgcaaaagatgaggggtcaggccttcctcgtc
ttcaccgacctcgcagcggccacatctgccctccgcgcgacggacggcatgctattctac
gacaagcccctccgcgttcaatacgcaaaaacaaagtcgtatgcgaccatgcgtcgcgaa
gaccccaacttcgttcctcccaccgcagcccacggccgtcccctcacagactcacaagtc
aaacccatcggtggcgccggctcgtccgtccaaaagcggacccgcgaagacgaggacatg
gaggacggacgcgcacagaagcagaagaaagcggcggcagcggaggaggaaagcgatgat
gaggagatggagatagacgacgacgaagatggtccgccggcgcaacaaggaggagagcag
gcggcgactggggcggctacgactatcccgcaaacggcaggacgatcctcagcgcggtta
ctgtgtacgaaccttcccggcgaagtcacggatagcgtgttgtccgtgctattccaacaa
taccaaggattccagtccacgcaggtcgccccagcaccgacagcgacagcaaacgccgcg
ggccaaaagggcaagatggcccaggtcgtgttcgatacacccgagctcgcctccgtcgca
aaagaggctctggacgggtttacgctgaaaaagggctggaagatgactgttgcgttcgtt
tga
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