Stereum hirsutum: STEHIDRAFT_170227
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Entry
STEHIDRAFT_170227 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
shs
Stereum hirsutum
Pathway
shs03013
Nucleocytoplasmic transport
shs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
STEHIDRAFT_170227
03015 mRNA surveillance pathway
STEHIDRAFT_170227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_170227
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
STEHIDRAFT_170227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
18803663
NCBI-ProteinID:
XP_007306868
JGI:
Stehi1_170227
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MRFGVPRSESPSPVRHRSTYGIHSSVLMSDEDDTSGSESDITTSSNDWIPHNTSGVISRS
QIQAMANDPSASARPPLSVQERHFIEDTIASIRLHTHHHDPYEEWEKRTRRDAFRSARKE
QALSISARQANISVSQSRATAAQEASFQADMNSVNDLLSSLKLKHEREEADLVARWKERS
KKMWEKIEGAIKFEEEKVRVKLEKERKLKEEEEKKRKAEELKRRIAEEKRKAEEERKKKE
EEEEQKRRVAEEEERKKAEEVERKKAEQLAKEAEERKALGMATAEEDWIGARSTLKKLKA
GPIAAVKGNPELKKLANANRRKITPKIGQLTNDTQAINEISSFILQVFQQQLPPAIFLSL
GSSLAKAILLQAETEVTAEKRSAYPLAQLTINLLSVFPPPFSEIFFARLLSRCGGWVIPI
PSPPTPTFKDKDVDGMLWTANPKAKRKAQGMYREDEVNGSAEMVARVAGIMRVYFTMLVI
DHPKPMAKVYQTGRLWAWLARLMGSPGLLTHPLAAELIYVALEVGGEKARDVWGQQWIKL
MGLIYEGVTQGIAGTDKRIGGTSTEGKAAQIRVQLEIERIMFGRK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcggtgtcccgcgttcagagtcgccttctccagtcagacaccgctcgacctat
gggatccattcttcggtactcatgtccgacgaagatgacacctctggctcagagtcggac
atcacgacctcatcaaacgattggatacctcacaacacgtcaggagtaatcagcaggtct
cagattcaagcaatggcaaacgatccatccgcttctgcacgacctccactatccgttcaa
gagagacactttatcgaggacactatagcttcaatccgcctacacacgcaccatcatgat
ccctatgaggaatgggaaaaacggacacgcagggacgcattccgttcagctcgcaaagag
caagccctctcaatatccgcacgtcaagccaacatctccgtctcccaatcgcgcgccacg
gccgctcaagaagcatccttccaggccgacatgaactccgtcaatgacctcctctcttcc
ctcaaactcaagcatgaacgcgaagaagctgatctggtggctcgatggaaagagcgctcg
aagaagatgtgggagaagatcgagggggcgatcaagtttgaggaggagaaggtcagggtg
aagttggagaaggagagaaagcttaaggaagaagaggagaagaagcggaaggctgaggag
ttgaagcggaggattgcggaagagaagaggaaggcggaggaggagcgcaagaagaaggag
gaggaagaagagcagaaaagaagagtggcggaggaggaagagaggaagaaagcggaggag
gtggagaggaagaaggccgaacagctcgcgaaggaagctgaggagaggaaggcattgggt
atggccacagccgaggaggattggataggcgctcgctcgactttgaaaaaactcaaagcg
ggccccatagccgcagtgaaaggcaacccagaactaaagaagctcgccaacgctaaccgg
cgcaagatcacgccaaagatcggccaactcacgaacgacacccaagccatcaacgaaata
tcctcgtttattctacaagtgttccagcaacaactcccaccagccatcttcctctccctc
ggctcctccctcgccaaagcaatcctcctccaggcagaaaccgaagtcaccgccgaaaaa
cggtctgcctatcccctcgcccaactgacaatcaacctcctctcggtctttccaccccct
ttctccgagatcttcttcgcacggctactctcccgttgcggtggttgggtcatcccaata
ccttctccccccacaccgacattcaaggacaaagacgtcgacggtatgctatggactgcc
aatcccaaagcaaagagaaaggcgcaggggatgtatagggaggatgaggtgaatggatcg
gcagagatggtggcaagggtggcggggatcatgagggtgtatttcacgatgcttgtgatc
gaccatccgaagccgatggcgaaggtttaccagacgggcagattgtgggcctggttggcg
aggctgatgggctcaccagggttgttgacgcatccgttggcggcggagttgatctacgtg
gcgctcgaggtaggcggagagaaagcgcgcgacgtctggggccaacaatggatcaagctc
atgggcctcatctacgagggtgtcacgcagggtatcgcgggcacggacaagcgtatcgga
ggaacttcgacggagggcaaagctgcgcaaattagggtgcagctcgagatagagaggatc
atgtttggtagaaagtga
DBGET
integrated database retrieval system