Stereum hirsutum: STEHIDRAFT_171035
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Entry
STEHIDRAFT_171035 CDS
T03127
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
STEHIDRAFT_171035
Enzymes [BR:
shs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
STEHIDRAFT_171035
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
18803796
NCBI-ProteinID:
XP_007308075
JGI:
Stehi1_171035
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MLRSSLFLGLCALATLVSSVLGWTVTVSGNNYIVDTSGGLIFTVDHTTGDITSMLYNGIE
AQDQSGKHSQISSGIGATCTYEFTGNDDHYVVIACTTSTLVHYYVAKYKDPAIHMVTYTT
AEPSVGELRYIFRLNSATLPNGYTQSAICDDAIEGSDVFYCDGQTRSKFYSSQRFIYDKV
HGVTGSNIGAYIILSQYAYEKSSGGPFFRDINNQHGDQNELYFFQNSGHVQTEAYRQGLH
GPYTLYFTTGAVPSTDIDLTFWEGLGISAYTPLASRGYVSGKAIGIDLTSFNATVAFNNS
ANQYWVQADSSTGNFYTTGMIPGTYAMILYKNELAVAESSVTVTAGSTTSKNIDSAEDAP
STVIWQIGDFDGQPRGFLNADMIETMHPSDSRMHDWVRTYTVGQEDIGYFPMAIFKDVGV
VTIRFALASGQGGARTLDIGTTWSFAGGRPQVTVNGWTGPTPAAPTNLDSRGVTRGTWRG
NNVLYTVDIPDGTLYTGSTVNVITINVVSGSSGDTYLSPNIVFDAIRLY
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgttcttccctttttctcggcctttgcgccttggccactttggtctcttcggtt
ttgggctggacggtcaccgtgtctggtaacaactacattgttgatacatctggtggactt
atttttactgtggaccacactaccggcgacattactagcatgctgtacaacggaattgag
gctcaagaccagagcggcaagcacagccaaatttcgtcaggcattggcgcgacctgcaca
tacgaattcactggcaatgatgaccactacgtcgtcatcgcctgcacgacgtcgaccttg
gtgcactactatgtggcgaaatacaaggatccagccatccatatggtcacttatacgacg
gcagagccaagtgttggcgagctgcgctacatcttccgcctgaattctgcgaccctgccc
aacgggtatactcagtctgcgatctgcgacgatgccatcgagggctccgatgtgttttac
tgcgatggacagacgcgttcgaagttctactcttcccagcgattcatctatgacaaggtt
cacggagttacaggtagcaatatcggtgcatacataatcctctctcaatatgcttatgag
aagtccagtggtggccccttcttccgcgacattaacaaccaacacggtgatcaaaacgag
ctctacttcttccagaattctggtcatgttcagaccgaagcttaccgccagggcctgcac
ggcccctacactctttactttaccacaggagccgttccctccactgacattgacctcact
ttctgggagggtctcggtatctctgcatatacccctcttgcgtctcgcggatacgtctca
gggaaggccatcggtattgacttgacaagcttcaacgccactgttgcgttcaacaactcg
gcaaaccaatactgggttcaagcagacagcagcactggcaacttttatacgactggcatg
attccgggaacatatgcgatgattctttacaaaaacgagctagccgttgcagagtcttcg
gtgaccgtcacggcaggcagtacaacctccaagaacatcgactcggcagaggatgctcca
tctactgtcatctggcaaataggggactttgacgggcagccaaggggattcttgaacgcc
gacatgatcgaaacgatgcaccctagcgattctcgtatgcacgattgggtgcgaacctac
acggttggtcaagaggacatagggtacttccccatggccatcttcaaggacgttggggtg
gtgaccattcgatttgctttggcttctggccaaggaggtgctcgtaccctggatatcgga
acgacctggtcctttgctggtggacgcccccaagtaaccgttaatggttggactggtccg
actcctgctgctcctacgaatcttgatagccgtggtgtaacgcgcggcacctggagaggc
aacaacgtactgtataccgtcgacattccggacggtactttgtatactggctccacagtg
aacgtcataacgatcaacgttgtctctgggtcctctggcgacacttacctgtcaccgaac
atcgtcttcgatgccattcgactttactaa
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