Stereum hirsutum: STEHIDRAFT_171183
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Entry
STEHIDRAFT_171183 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
shs
Stereum hirsutum
Pathway
shs03022
Basal transcription factors
shs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
STEHIDRAFT_171183
09124 Replication and repair
03420 Nucleotide excision repair
STEHIDRAFT_171183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_171183
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_171183
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
STEHIDRAFT_171183
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
STEHIDRAFT_171183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
DUF5959
Motif
Other DBs
NCBI-GeneID:
18803823
NCBI-ProteinID:
XP_007308231
JGI:
Stehi1_171183
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MSSSLIAARASYKKLQGLLELTESDITWTQDGKQNSAVTVPRSKAASLFSSKEGTPQVKL
KIGLVHDETGHTFTFTSPQPTALIEREKFKSELTVIVAQNRTIRDAQAAAQNGSASTPKP
TLPTSGIPRPPLPGSVQPHASTSRAASVSSNAGTPGPQNDPINDFRLRKKVLVQTPELAA
LHRELVMTRQISEAEFWEGREHLLLAQAASDAQKKGRPGQLVDPRPQTVDGGEIKIVVTP
QLVHDIFEEYPVVSKAYSENVPSKLSEADFWKRYFQSKLFSSHQASIRSTAAQHVVKDDP
IFDKYLERPDDELEPRRQRDEDVGMFIDLGATNEDHGEAWSEKDVTMQAGKQRGALPLIR
KFNEHSERLLKASGSEGPSPKRRRIDPSSGTDSRYSEIDLPDLHDPESSAGILLQMQDRQ
RYFEGRTGSIVAAEQNARPAVDVRAALQAAKSDLRDWSNNLGQLKLDRKATDSAVLSMTQ
NVAARLDVKSRKNDIPDEIFRQMSTCQTAANEFLRQFWSAIYPSASNAQTLAPSTPAQKA
DKAARMAGYLGKTHEKVAAIVVTAHKSGVDMEKIEIAMKPILDAVDKALAFWSSRKST
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctctctgatcgccgcgagagcgtcgtacaagaagctacaaggtctgctcgag
ctcacagaaagcgacataacctggacacaagacggcaagcaaaattccgccgttaccgtc
ccacgctcaaaagcggcctcgctcttctccagcaaggagggcacaccacaggtcaagctc
aagatcggcctcgtccacgatgaaacgggccacactttcactttcacctctcctcaaccc
actgcgctcattgaacgcgagaaattcaagagcgaactgaccgtgatcgttgctcagaat
cgcacaatacgtgatgctcaggctgctgctcagaatgggtctgcgtcgacaccaaaacct
acgcttcccacttccggaatccctcgcccaccattgcccggttctgttcaacctcatgcg
tcgacctctcgagcagcctccgtgtccagcaatgcaggcacacctgggccacagaacgac
cccatcaacgacttcagactacgcaagaaggtcctcgtgcagacaccagagcttgctgcg
cttcaccgggagctcgtaatgactcggcagatctcagaggcggagttttgggaaggtcga
gagcaccttctgctggcccaagcggcctcagatgcacagaagaagggccgcccaggtcaa
ttagtcgatcccaggccacaaactgtagacggcggggaaatcaagatcgtggttacgcca
cagctcgtccatgacatctttgaagaatatcctgtcgtgtcaaaagcttacagcgagaac
gtcccgagcaagctctcagaagccgacttttggaagcggtacttccaatcaaaactgttc
agttctcatcaggcctcgattcgttcaacggcagcacaacacgtcgtcaaggatgaccca
atatttgataaatatctcgaaaggcctgatgatgagctggagccgagacggcaaagagac
gaggatgtgggaatgttcatagacttaggggcaacgaatgaggatcacggagaagcatgg
agtgagaaggacgtgacaatgcaagcgggaaaacagaggggcgcattacccctcatccga
aagttcaacgagcactccgaacgtcttctcaaagcttcaggatccgaaggaccttcaccc
aaacggagacgaatagacccatcttccggaaccgactcacgatactccgaaatagacctt
ccagatctgcatgacccagagtcttcagcaggtatcttactccagatgcaggaccgtcag
cgctactttgaaggtcgaacagggtctatcgttgccgcagaacagaacgctcgaccggcg
gttgacgtccgagcagcactacaagctgcaaagagtgaccttcgcgactggtcaaataac
cttggacagctcaaacttgatcgaaaagcgacagactctgccgtcctctctatgacccag
aacgtcgccgcccgtctagacgtcaaatcgcgaaagaacgacatccccgacgagatcttc
cgccaaatgtccacctgccaaaccgccgccaacgagttcctacggcagttctggtccgcc
atctatccctctgcctcgaacgcacagacactagctccctccacaccggctcaaaaggcc
gacaaggcggcgaggatggctggatatctgggcaagacccacgagaaagtggcagcgatc
gtcgtgacggcgcataagtcaggtgtagacatggagaaaatcgagatcgccatgaagccg
attttggatgccgtggataaagccctggccttttggagcagccgaaaatcgacatga
DBGET
integrated database retrieval system
