KEGG   Stereum hirsutum: STEHIDRAFT_47086
Entry
STEHIDRAFT_47086  CDS       T03127                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
shs  Stereum hirsutum
Pathway
shs03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    STEHIDRAFT_47086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shs03021]
    STEHIDRAFT_47086
   03019 Messenger RNA biogenesis [BR:shs03019]
    STEHIDRAFT_47086
Transcription machinery [BR:shs03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     STEHIDRAFT_47086
Messenger RNA biogenesis [BR:shs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     STEHIDRAFT_47086
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_2 Torus zf-CCHC zf-CCCH_4 zf-CCHC_3 zf-CCHC_2 F-box_5
Other DBs
NCBI-GeneID: 18804807
NCBI-ProteinID: XP_007298034
JGI: Stehi1_47086
LinkDB
Position
Unknown
AA seq 296 aa
MAIAHPLAGPSVLRDIVNPQFHQNNFPEELFIKQELGIKLDKDEQICRLNLSQTGCPLGP
SLCPLRHTNPSAQNFQPPKQLPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRM
PECWWYAKYGYCSAGDECLYAHPKERKVECPDYKRGFCKLGPKCPRKHIRRVACQLYLTG
FCPLGPDCPRGHPKPNIPPPKAYDPPEPPSHRDLGPPPPGYGRYADFDRTFLSGGGGGGG
QGPGFNSGPRRNLDEVLCFKCGEKGHYANHCRNRNVPGNRGGVDRSGVKRFDTDED
NT seq 891 nt   +upstreamnt  +downstreamnt
atggccattgcacaccccctcgctgggccgtctgtgctacgggacatcgtcaaccctcag
tttcaccagaacaacttccccgaagagctcttcatcaagcaagaactaggcatcaagctc
gacaaggatgaacaaatatgccgcctcaacctctcccaaaccggctgccccctcggtccc
tccctctgcccgctccgccacaccaacccctccgcccaaaacttccagccccccaaacaa
ctcccgacccacccccgggaccgcgaacgtctcgcgacggtatgcaagcactggctgcgc
gggctctgcaagaagggcgatgcctgtgagttcttgcatgagtataacctgaggcggatg
cccgagtgttggtggtatgcgaagtatgggtattgttcggcgggcgacgagtgtctctat
gcgcatccgaaggagaggaaggtggagtgtccggattataagagggggttttgtaagctc
ggcccgaaatgtcctcgaaaacatatacgaagagtagcctgccaactctacctcaccggt
ttctgtcccctaggtcccgactgtccacgaggccatccaaaaccaaacatcccccctcca
aaagcctacgacccccccgaacccccttcccaccgcgatcttggccccccgccccccggc
tacggccgctacgcagatttcgaccgtaccttcctttctggtggaggcggtggaggcggt
caaggtcctgggttcaattcgggtccgaggaggaatttggacgaggttttgtgctttaag
tgcggagagaaaggtcactatgcgaaccattgtcggaatcggaacgttcctggtaatcgg
ggtggtgttgataggtctggggtgaagcggttcgacacggacgaagattga

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