Stereum hirsutum: STEHIDRAFT_47906
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Entry
STEHIDRAFT_47906 CDS
T03127
Name
(RefSeq) glutamate-rich WD repeat-containing protein
KO
K14848
ribosome assembly protein RRB1
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shs03009
]
STEHIDRAFT_47906
Ribosome biogenesis [BR:
shs03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
STEHIDRAFT_47906
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
CAF1C_H4-bd
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_RFWD3
EIF3I
Beta-prop_DCAF4
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
18804852
NCBI-ProteinID:
XP_007298079
JGI:
Stehi1_47906
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
METDEMGEFEDAWEDEIEDDEVMGEEGGNDVMDVDDEVMPPIEETEEKPPAPSVYIPGVH
TLGKDEILEADDSVYIMRHTMNVNWPCLSFDVLRDNLGDQRQRYPATAYIVAGTQADVAK
NNELSVYKMSSLHKTQKDDNSDDSDDENDDEDNLDEDAILESRSVPHLGGVNRVRAQPLP
PSSLLPPASQPYHVASWSETGKVHIWDVRPLIESLDVPGYTYDKSRTQTPTHTISSHGTA
EGFAMDWAASGSSNASGLRLLTGDVHSKIYLTTSTPSGFNTLREPFTSHTSSIEDLQWSP
SEPTVFASCSADQSVRVWDVRSKGRKSVAGMDVAHSSDVNVISWNRSTTYLLLSGGDEGG
IKVWDLRNVKQRGTSAPDPTPVASFSWHGGPITSIEWHPTEDSIFAASGADDQVTLWDLA
VEQDDDESGAMDDTPQGGRDVPPQLLFVHQGQKDVKEVHWHPQMPGTVISTALDGFNIFK
TISV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggacgagatgggagagttcgaggacgcatgggaggacgagatcgaggacgat
gaagtgatgggtgaagagggagggaacgatgtcatggacgtcgacgacgaggtcatgcct
cccatcgaagaaacggaagagaaacctccagcaccgagcgtctacatacccggcgtacac
acacttggaaaggacgagattctggaggcagacgattcggtgtatatcatgcgacacacc
atgaatgtgaactggccatgcttgtctttcgacgtgcttcgggataatttgggagaccaa
cggcagagatatcccgccacagcttacatcgtcgcggggactcaggcggatgtggcgaaa
aataacgagttgtcggtttataaaatgagctcgctgcacaaaactcagaaggacgacaac
agtgatgactctgacgatgaaaatgacgatgaggacaatctcgacgaagatgccatcctc
gagtctcgttcggtgccacatcttggtggcgtaaaccgagttcgcgcacaacctctcccc
ccttcctcactactaccacccgcctcacaaccatatcacgtcgcatcatggtccgagacc
ggcaaagtacacatatgggatgtccgaccacttatcgaatcgctcgacgttcccggctat
acctacgacaagtcgcgcacacaaacacctacgcatacgatatcctcccatggaacagcc
gaaggtttcgcaatggactgggccgcatcaggctcttcgaatgcatctggacttcgtctc
ctcacaggcgatgttcactccaaaatctatcttacgacttccacaccttctggcttcaac
acactcagggaacccttcacttcgcacacatcgagcatcgaggacctccagtggagccct
tcagaaccgacggtgttcgcgtcttgttcggcagatcagagtgttagggtttgggatgtg
aggagtaaagggaggaagagtgtggcggggatggatgtggcccattccagtgatgtgaat
gtcatcagttggaaccggagcacgacatatcttttgctcagcggtggtgacgagggtggt
atcaaggtatgggacctgcgaaacgtcaaacagcgcgggacttccgctcccgaccctacg
cccgtcgcgtcattctcgtggcacggaggacccattacctctatcgaatggcacccaact
gaggactctatcttcgccgcctccggtgcggacgatcaagtcacactctgggatctcgcc
gtcgagcaagacgacgacgaatcgggcgcaatggacgatacaccacagggtggtcgcgac
gtgccgccccagctactctttgtccaccagggccaaaaagacgtcaaagaggtccactgg
catccacagatgcccggaacggtgatcagcactgctctcgacggattcaatattttcaag
actatatctgtatga
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integrated database retrieval system
