Stereum hirsutum: STEHIDRAFT_49489
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Entry
STEHIDRAFT_49489 CDS
T03127
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shs
Stereum hirsutum
Pathway
shs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STEHIDRAFT_49489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_49489
Enzymes [BR:
shs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
STEHIDRAFT_49489
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STEHIDRAFT_49489
Prokaryotic type
STEHIDRAFT_49489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
MFS18
Foie-gras_1
Motif
Other DBs
NCBI-GeneID:
18804996
NCBI-ProteinID:
XP_007299354
JGI:
Stehi1_49489
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MFSVAPKDGAGPASKKLKASPSLSSVSGSLVPGPSKGTSSSSTKIGFVPLNSIPFSLSAY
LESLTEDQRRLLQLECETLGKSWLKLLKDEIKKPYFIALKEWLWEQGLKGPNDTPMPLKI
YPAPKDIYSWSNFTPLGRVKVVIIGQDPYHGARQAHGLSFSVPTGVAVPPSLRNIYAEIK
AEFPEFVAPNHGNLTAWAENGVLMLNTCLTVRAGEAGSHSKRGWEEFTDKVVDVVDRRGR
GCVFLCWGAWAAKRVAKLDGNKHLILTSAHPSPFSAHKGFLGNGHFAKANEWLENRYGKE
SKVDWCTL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagttgctcccaaggatggtgctggaccagcgagcaagaagctgaaagcatct
ccctctttgtcttctgtttccggttcgctggttcctggaccctcgaagggcacctcctct
tcttccaccaaaataggatttgtcccattgaactccatacccttttcgttgagtgcgtat
ctcgagtcgctcactgaggaccaaagaaggttattgcagctggagtgtgagacactgggc
aagagctggttgaagctcctgaaggatgagatcaagaagccgtacttcattgccttaaaa
gagtggttgtgggagcagggcctcaaaggtccgaacgatactccgatgccgctcaaaata
taccccgcacccaaagatatctattcgtggtctaatttcaccccgttgggtagagtcaag
gtcgttatcatcgggcaggacccgtaccatggagctaggcaggcgcatgggctatcgttc
tctgtacctactggggtcgccgtgcctccgtctctgagaaacatatacgccgagatcaag
gcggagtttccggagtttgtcgctccaaatcatgggaatctgaccgcctgggccgaaaat
ggtgttctgatgttgaacacttgtctgaccgtgcgggccggagaagcgggttcacattcc
aagcgaggctgggaggaattcacagacaaggtcgtggacgtcgtggatcgacgtggccgt
gggtgtgtcttcctatgctggggggcgtgggccgcgaagagggttgctaaattggatgga
aacaaacaccttattctcactagcgcacacccctcgccgttcagtgcgcacaaaggcttt
ctaggcaatggtcatttcgcgaaagcgaacgaatggctcgaaaatcgttacgggaaagaa
agtaaagttgattggtgtaccttatag
DBGET
integrated database retrieval system
