KEGG   Stereum hirsutum: STEHIDRAFT_53519
Entry
STEHIDRAFT_53519  CDS       T03127                                 
Name
(RefSeq) hypothetical protein
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
shs  Stereum hirsutum
Pathway
shs03020  RNA polymerase
shs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    STEHIDRAFT_53519
  09124 Replication and repair
   03420 Nucleotide excision repair
    STEHIDRAFT_53519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shs03021]
    STEHIDRAFT_53519
   03400 DNA repair and recombination proteins [BR:shs03400]
    STEHIDRAFT_53519
Transcription machinery [BR:shs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     STEHIDRAFT_53519
  RNA polymerase III system
   RNA polymerase III
     STEHIDRAFT_53519
  RNA polymerase I system
   RNA polymerase I
     STEHIDRAFT_53519
DNA repair and recombination proteins [BR:shs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      STEHIDRAFT_53519
SSDB
Motif
Pfam: RNA_pol_N Zn_ribbon_Com
Other DBs
NCBI-GeneID: 18805306
NCBI-ProteinID: XP_007301568
JGI: Stehi1_53519
LinkDB
Position
Unknown
AA seq 77 aa
IIPVRCFSCGKVIGDKWNAYLELLSQDKSEGEALDELQLKRYCCRRMVLTHVDLIEKLLH
YNPMERTKDKRDYMAQS
NT seq 234 nt   +upstreamnt  +downstreamnt
atcattccagttcgctgtttctcgtgtggaaaggtcatcggtgacaaatggaatgcctac
cttgaactgctttcgcaggacaagagcgaaggtgaggcgctggacgagctgcaactgaag
cgatactgttgtcggcggatggtcttgacccacgtcgacctcatcgaaaaacttctccat
tataaccccatggagcgcacaaaagacaagagggattacatggcccagtcatag

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