Stereum hirsutum: STEHIDRAFT_57130
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Entry
STEHIDRAFT_57130 CDS
T03127
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10756
replication factor C subunit 3/5
Organism
shs
Stereum hirsutum
Pathway
shs03030
DNA replication
shs03410
Base excision repair
shs03420
Nucleotide excision repair
shs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STEHIDRAFT_57130
03410 Base excision repair
STEHIDRAFT_57130
03420 Nucleotide excision repair
STEHIDRAFT_57130
03430 Mismatch repair
STEHIDRAFT_57130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shs03032
]
STEHIDRAFT_57130
03036 Chromosome and associated proteins [BR:
shs03036
]
STEHIDRAFT_57130
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_57130
DNA replication proteins [BR:
shs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
STEHIDRAFT_57130
DNA Replication Termination Factors
ELG1-RFC complex
STEHIDRAFT_57130
Chromosome and associated proteins [BR:
shs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
STEHIDRAFT_57130
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
STEHIDRAFT_57130
Check point factors
HRAD17(Rad24)-RFC complex
STEHIDRAFT_57130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_30
DNA_pol3_delta
AAA_11
AAA_assoc_2
AAA_14
AAA_19
DUF815
RuvB_N
AAA_22
AAA_24
ResIII
AAA_16
AAA_5
DEAD
AAA_3
AAA_7
Viral_helicase1
ATPase_2
MCM
nSTAND3
AAA_28
IstB_IS21
bpMoxR
AAA_18
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
18805549
NCBI-ProteinID:
XP_007303952
JGI:
Stehi1_57130
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MNASDAESTKPVFASSAKGKGKAVDRGAQDVSQDETLPWVEKYRPNSLDDVVSHKDITST
IEKFIEKNRLPHLLFYGPPGTGKTSTILAVARRIYGAGYKKQTLELNASDDRGIDVVREQ
IKQFAETRTLFSKGYKLIILDEADMMTTAAQAALRRVIEQYTKNVRFCIICNYVNKIVPA
IQSRCTRFRFSPLPMKEVEKRVDHVVAAEGVKLTEDGKKALLKLSKGDMRRALNILQACH
AAYDQTGETEVYNCTGSPEPADIETVVNSMITDEFTTSYHMISTLKTERGLALQDLLIGA
YEYIEGIDFPPAARVYLLDHLATTEHRLSTGGSEKIQLTALLGAFKNAVELTEKAKES
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgtctgatgcagagtccactaagccggtcttcgcatcctcggccaagggaaaa
ggcaaggctgtcgaccgaggtgcacaagacgtgtcgcaggacgaaacacttccatgggta
gagaagtatcgaccgaattcgctggatgacgtagtatctcacaaagacatcaccagcact
attgagaagttcatcgagaagaataggttaccacatctgttgttctatggaccacctgga
actggaaagacgtctactatcctcgcagtagcgcgtcgtatatacggagcaggttacaag
aagcaaacactagagttgaatgcttcagacgaccgtggtatcgacgtcgtccgcgaacaa
atcaaacaattcgccgaaacacgcacgctcttctccaagggctacaaactcatcatcctc
gacgaagcagacatgatgaccacagcagcccaggccgccctccgccgcgtcatcgagcaa
tacacgaagaatgtccgcttctgcatcatctgtaattatgtgaataagatcgtgccggcg
atacagagtcgctgtacgaggtttaggttctcgccgttgccgatgaaggaggtggagaag
agagtggaccatgttgtggcggctgaaggtgtgaagttgacggaggacggaaagaaggcg
ctgttgaagctctctaaaggcgacatgcgacgagccctcaatatcctgcaagcatgccac
gctgcatacgaccagaccggtgaaaccgaagtgtataactgtacaggaagccctgaaccc
gctgatatcgagaccgtggtcaactcgatgatcacggatgagttcaccacgtcttaccac
atgatcagcacgttgaagacagaacgaggtctcgcactgcaggacctactgataggtgca
tacgaatacatcgaaggcatcgacttccctccagctgcgagagtatatctactagatcat
ctagcgacgaccgagcatcgactctcgacaggcggtagcgagaagatccagttgaccgcg
ttattgggcgcgttcaagaacgcggtggagttgacggaaaaggcgaaggaatcatag
DBGET
integrated database retrieval system
