Stereum hirsutum: STEHIDRAFT_57444
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Entry
STEHIDRAFT_57444 CDS
T03127
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
shs
Stereum hirsutum
Pathway
shs03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STEHIDRAFT_57444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shs03032
]
STEHIDRAFT_57444
Enzymes [BR:
shs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STEHIDRAFT_57444
DNA replication proteins [BR:
shs03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
STEHIDRAFT_57444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
18805580
NCBI-ProteinID:
XP_007303983
JGI:
Stehi1_57444
LinkDB
All DBs
Position
Unknown
AA seq
1452 aa
AA seq
DB search
MSERARRDRKDKLAKLAEYKKAREGGGRTWKDEEEADLYDVVTEDQYKSIVKGRLQKDDF
VEDDGVDGYMDNGMDDWTGGGDSQDEEEEHDRRASKKTNGKSKSKPKAKAPPPPAPAPIA
AYRPAVSVEQESDFMSALLGDMDTKPVPAASKHASGSRKRKPSPSYRYASRSSSPPRPAY
RNGDSSHDPYSDAPSSDGFDNGFEPPSDYDVVERVPSPRKRPRTGEMPEIKPAIEKMGKM
DVGATTDEDIDYDASFDEMDMSSFMEVDEEPTVKVEPKPVDLKPSKPAKPETKKEEEHPS
WLSVYDSLAVAGDESFGTLNTAAATAPQNTNNISALEPDGSFRFFWLDYLEHEGVLYFIG
KTLDKTTKAWVSCCVAVNNLQRNLFVLPREKRQDGEGYETDVVPGMKDVYSDFDQVRKKA
GIKTWKAKFVKRKYAFGVADVPKEETSWLKVVYGFDEPQIPTDVTSPNFSRVFGSNTSAF
ELLVIKRRIMGPCWIKVQKPHVEHQGASWCKMEVIVSDPKDFNPFSETDAHAPKEMPPLT
VASLSVRTIVNHAENIREIVCVTARIWSNFQIEDGTPPEQLPCSVHTLVRPLERFPPNFE
NVVRSNGKGTISAVLNERMLLSSLLRKITLHKADPDVVVGHEFLGVSLDVLLHRMRELKV
DHWSRLGRFRRVKWPNIGRQGTNIRFLQGRLLCDLGSDAAKSMISSTTWALTEMCKTHLK
VDRQDIDADETHEYFDFAVKGPEKLVRFVRHCELDAHLQMALACKVQMLPLTRQLTNLAG
NSWNKTLNGGRAERNEYILLHEFHRLKYICPDKQWGRKAAQIKVEVDEDGEETGKKSKNK
KDKYKGGLVFEPKRGLWDKYILVMDFNSLYPSIIQEYNIDFTTIDRPEAEDGEEEKIPEP
PEDDVPQGVLPRLIATLVNRRRQVKSLMKDRSLPHAKLLQFDIKQQALKLTANSMYGCLG
FEGSRFFARPLAALTTFKGREILTNTRELAESLQLDVIYGDTDSLFVNSNVTELSDALKI
SAEFKKAVNERYKLLEIDLDGVFQRLLLLQKKKYAAIKVEDGTRTTTEVKGLDMKRREYC
ALSKSVSQYVLDQILSGEPTEVVVENIHEYLTTLSTSIRTNQVKVEEFIIFKRLGKNPKD
YPDAKSQPHVQVAFRMKERLGVDSRAGDVIPYIFCLEGKATEGSGGKTGQAERARHPEEI
KKAAEELKIDYEYYLANQILPPVERLCDPIEGTDRARLAECLGLDPGRYRHNVVGEAEER
YFGTLDSQVPDSERYKDAEPFIVRCRHCEAHTAFSPIGDRDSSIVLPSGPTCPACKKPFS
TASLQVQLEAEIRKSIARYYEAWTVCDDPTCGNRTRQMAVYGRRCLKPGCRGKVAFEFSD
AEMYNQLRYLAYLFDVEKAAKAATGKRHDDIVTLGTLQADFLQRMSQAVEKYLDRSGRRW
VDMGSLFSFMKI
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgtgcgaggcgtgatagaaaggacaagcttgcgaagttagcggaatataag
aaggcgagagaaggaggaggtaggacatggaaggatgaagaagaagctgatctatacgat
gtcgtgaccgaggaccaatacaaaagcatcgtcaagggccgcctccagaaggatgatttc
gttgaagatgatggtgtagatggttatatggacaacggcatggatgattggacgggcggt
ggtgacagtcaggatgaggaggaagaacacgatagacgagcttcgaagaagactaatggg
aagtcaaagtcgaagcctaaagcgaaagcccctcctccaccggcacctgcgcctatcgca
gcctatcgacccgccgtctccgttgaacaagagagcgacttcatgtctgccctactaggc
gacatggacaccaagcctgtacccgccgcatctaaacacgcttcagggtctaggaaacgc
aaaccttcaccgagttatcgctacgcctcccgatcatcatctcctcctcgtccggcttac
cgaaatggcgacagtagtcacgatccttactctgacgcaccaagttcggatggattcgac
aatggcttcgagccaccctctgattatgatgtcgtcgaacgggttccaagcccgcggaag
aggccacgtacaggcgagatgcccgaaataaaaccagctatcgagaaaatgggcaagatg
gatgtaggcgcgaccactgacgaagatatcgattatgacgcgtctttcgacgagatggac
atgagctcgtttatggaggtggacgaagaaccaacagtcaaagtcgaacccaagcccgtc
gaccttaagccttcaaagcctgcgaaaccagaaaccaagaaggaggaagaacatccatca
tggctctccgtctacgactctcttgctgtcgctggcgacgaatcgtttggtaccctcaac
acggctgccgccactgccccgcagaacaccaacaatatttccgccctcgaacctgacggc
tcgttccgcttcttttggctcgactatcttgagcacgaaggtgttctctactttatcggc
aagactctcgacaaaacaacgaaggcatgggtctcatgctgcgtcgccgttaacaacttg
cagcggaatctattcgttcttcctcgagaaaaacgacaggacggcgaaggttacgagact
gatgttgtgcctgggatgaaagacgtttacagtgacttcgaccaggtgcggaagaaggca
ggcatcaagacgtggaaggccaagtttgtgaagaggaaatacgcgtttggagtggctgat
gttccaaaggaggagacttcgtggttaaaggtcgtctatgggttcgatgaaccacaaata
cctaccgatgtcactagcccgaacttctctcgcgttttcggtagcaacaccagtgcgttc
gaacttctcgttatcaagcggcggataatgggcccctgttggatcaaggtgcagaagcca
cacgtcgagcaccagggagcctcgtggtgtaaaatggaagtgattgtgagcgacccgaag
gacttcaaccccttttcagaaacggatgcccatgcacccaaggagatgccacctctcacc
gtcgcgagcctcagtgtccgaaccattgttaatcatgcggagaatatcagagagattgta
tgtgttactgcccgaatttggtcgaactttcagatcgaagacggtacgccaccggagcag
ctaccatgcagcgtgcacacgctggtacggccacttgaacgttttccaccgaacttcgag
aacgtcgtcaggtcgaatggcaaggggacgatttctgctgtgctcaacgagcgcatgctc
ttgagcagcctcctacgtaagatcactcttcacaaagccgacccagatgttgtcgtcgga
cacgagttcctcggtgtctccctcgatgtccttcttcatcgcatgcgcgagctcaaagtc
gatcactggtcccgtctcggtcgcttccgtcgcgtgaagtggcccaacattggtcgacag
ggcaccaacatccgtttccttcaaggtcggctactctgtgacctcggctctgatgctgcg
aagtcgatgatctcatcgacgacgtgggcgcttaccgagatgtgcaagacgcatttgaag
gtggacagacaggatattgatgcggacgagacacacgagtatttcgattttgcggtgaag
gggccggagaagttggttaggttcgtgaggcattgcgagctggatgctcatttgcagatg
gcgctggcttgtaaggttcagatgctgcctttaacgaggcagttgacgaatctcgcaggt
aactcatggaacaagacgttgaacggaggccgtgctgagcggaacgaatatattctgctg
cacgaattccatcggctcaaatatatctgcccggacaagcaatggggtaggaaggcggct
cagatcaaagtcgaggtcgatgaggacggcgaggagacagggaagaagagcaagaataag
aaggataagtacaagggtggtctcgtcttcgagccgaagaggggtttatgggacaagtac
atcctggtcatggacttcaattcgctgtaccccagtatcatacaagagtacaacatcgac
ttcaccacgattgatcgaccggaggccgaggacggcgaagaggagaagatccctgaacct
ccagaggacgacgtaccacagggtgttctcccacgtcttattgccacgttggtaaaccga
cgtcgacaagtcaaatctctcatgaaagaccgctcgctgccccatgcgaaactcctgcag
ttcgacatcaagcaacaagccttgaagcttacggccaatagtatgtacgggtgtttgggt
ttcgaaggctcgcggttctttgctcgacctcttgccgctcttacgacattcaagggtcgt
gagattctgaccaacacaagggagttggcggagagccttcaacttgacgtcatctacggt
gacacggactccctgttcgtaaactccaacgtaacggagctttccgacgccctcaagatt
tcagccgagttcaagaaggctgttaatgagcgatacaaactccttgagatcgacctggac
ggtgtcttccagcggctattgctgctgcagaagaagaagtatgccgctatcaaagtcgag
gatgggacacgaactacgactgaggttaaaggtctcgacatgaaacgacgagagtactgc
gcactctccaagtctgtgtcccaatatgttcttgaccaaatcctctcgggtgaaccgacc
gaggtcgtcgtcgagaacattcacgaatatctcaccacgctatctacctctatcagaacc
aaccaagtcaaagtcgaggaattcatcattttcaagcgactaggaaagaaccccaaggac
taccccgacgccaagagccaacctcacgttcaggtagcgttcaggatgaaggagagactg
ggtgtggactcaagggccggagacgtcattccttatatattctgcctcgaggggaaagcg
actgaggggtcaggagggaaaactggacaggcagagagggcgaggcatccggaggagatc
aagaaggctgctgaggagctgaagatcgattacgaatattacctggctaaccagattcta
ccacccgtcgagcgtctctgtgatccgatcgagggaacagacagagctcgattggctgaa
tgtctaggtcttgatcctggacggtacaggcacaatgtagtcggtgaagctgaagaacgc
tacttcggcacattggactcccaagtccccgacagcgaacgatataaagatgctgaacca
ttcatcgtgcggtgtcggcactgtgaggcacataccgccttttctcccattggtgaccgc
gattcttccattgtccttccttctggaccgacatgtccagcctgtaaaaagccgttcagc
acagccagtctgcaggtgcaactcgaagccgaaattcgcaaatcgatagccaggtactac
gaggcttggaccgtctgcgatgaccctacatgcggaaatcggacgaggcagatggcggtg
tatgggaggagatgtttaaaacccggatgtcgcggaaaggtcgcattcgagttttcggat
gcggagatgtacaaccagttgcggtacttggcctacttgtttgacgtcgagaaggcggca
aaagcagcaactgggaagagacatgatgatatcgtgacgctcggaacgcttcaggcggac
ttcttgcagcgaatgtcgcaggcggtggagaagtatcttgataggagcggtcggagatgg
gtcgacatggggtcgctgttctcgttcatgaaaatctga
DBGET
integrated database retrieval system
