Stereum hirsutum: STEHIDRAFT_58913
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Entry
STEHIDRAFT_58913 CDS
T03127
Name
(RefSeq) CAF1-domain-containing protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
shs
Stereum hirsutum
Pathway
shs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STEHIDRAFT_58913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_58913
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
STEHIDRAFT_58913
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
STEHIDRAFT_58913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
18805687
NCBI-ProteinID:
XP_007304643
JGI:
Stehi1_58913
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MSSTIREVWAPNLEAEMRNIRELIDRYPYVAMDTEFPGVVARPIGAFKTSSDYHYQTMRC
NVDLLKIVQIGLTLADEDGTPPQDVSTWQFNFHFSVNEDMYAPESIELLQKSGIDFQRHE
EIGIMPNDFAELMITSGLVLTDETRWISFHSGYDFGYFIKLLTALSLPTTEDAFFNVLKT
WFPTSYDIKTMMRASKLLKGGLQDVADDLGIMRIGPSHQAGSDSLLTSSTFFKMREIYFH
DQVDHEEYNGKLYGLGETFTVANGIPDPGRGGATIAEREDRSLSRDTQNQNSAGGQNHIG
MSLPTPAMGGALPTPLPPNATFGPMGANGAYIRTAIGVGGGR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgacgattcgagaagtatgggcaccaaacctcgaggcagaaatgcgcaatatc
agagaattaattgaccggtatccttatgtcgcaatggataccgaatttcctggtgtagtg
gcacgtcccataggcgcgttcaagacctcgtcggattatcattaccagacaatgcgctgt
aacgtcgatctgctcaagattgttcaaatcggtcttaccctcgcggatgaggacgggaca
ccaccacaagatgtgtctacctggcagttcaactttcacttcagtgtaaatgaagacatg
tacgccccggaatccatagagttgttgcagaaatccgggatcgacttccagcggcatgag
gaaattgggatcatgcctaatgattttgcggagttgatgattacgtcggggctggtgttg
acggacgagacaaggtggatctcgtttcatagcggctacgatttcggatacttcatcaaa
cttctcaccgcactctcattgcctacgacggaggacgccttcttcaacgttctcaagact
tggttccccactagttacgacatcaaaaccatgatgcgtgcctcgaaactgctcaaaggt
ggcttacaggacgtagcggatgacctcgggatcatgcggataggaccttcgcaccaagcc
ggctccgactcgctgctcacatcctcgacattcttcaagatgcgagagatctacttccac
gaccaggttgaccatgaagagtacaacggcaagctctacggcctcggcgagacgttcacg
gtcgccaacggcattccagaccctggccgtgggggtgcaacgatcgcggagcgagaagat
agaagtctcagcagggatacacagaaccagaactcagcgggtggacagaaccacataggc
atgtcgcttccaacgcctgccatgggcggcgctctaccgactcccttgccgccgaatgca
accttcggccccatgggtgcgaacggtgcatatatacgcacggctattggtgtgggtggc
gggagatag
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integrated database retrieval system