KEGG   Stereum hirsutum: STEHIDRAFT_58913
Entry
STEHIDRAFT_58913  CDS       T03127                                 
Name
(RefSeq) CAF1-domain-containing protein
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
shs  Stereum hirsutum
Pathway
shs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STEHIDRAFT_58913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shs03019]
    STEHIDRAFT_58913
Messenger RNA biogenesis [BR:shs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     STEHIDRAFT_58913
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     STEHIDRAFT_58913
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 18805687
NCBI-ProteinID: XP_007304643
JGI: Stehi1_58913
LinkDB
Position
Unknown
AA seq 342 aa
MSSTIREVWAPNLEAEMRNIRELIDRYPYVAMDTEFPGVVARPIGAFKTSSDYHYQTMRC
NVDLLKIVQIGLTLADEDGTPPQDVSTWQFNFHFSVNEDMYAPESIELLQKSGIDFQRHE
EIGIMPNDFAELMITSGLVLTDETRWISFHSGYDFGYFIKLLTALSLPTTEDAFFNVLKT
WFPTSYDIKTMMRASKLLKGGLQDVADDLGIMRIGPSHQAGSDSLLTSSTFFKMREIYFH
DQVDHEEYNGKLYGLGETFTVANGIPDPGRGGATIAEREDRSLSRDTQNQNSAGGQNHIG
MSLPTPAMGGALPTPLPPNATFGPMGANGAYIRTAIGVGGGR
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgtcctcgacgattcgagaagtatgggcaccaaacctcgaggcagaaatgcgcaatatc
agagaattaattgaccggtatccttatgtcgcaatggataccgaatttcctggtgtagtg
gcacgtcccataggcgcgttcaagacctcgtcggattatcattaccagacaatgcgctgt
aacgtcgatctgctcaagattgttcaaatcggtcttaccctcgcggatgaggacgggaca
ccaccacaagatgtgtctacctggcagttcaactttcacttcagtgtaaatgaagacatg
tacgccccggaatccatagagttgttgcagaaatccgggatcgacttccagcggcatgag
gaaattgggatcatgcctaatgattttgcggagttgatgattacgtcggggctggtgttg
acggacgagacaaggtggatctcgtttcatagcggctacgatttcggatacttcatcaaa
cttctcaccgcactctcattgcctacgacggaggacgccttcttcaacgttctcaagact
tggttccccactagttacgacatcaaaaccatgatgcgtgcctcgaaactgctcaaaggt
ggcttacaggacgtagcggatgacctcgggatcatgcggataggaccttcgcaccaagcc
ggctccgactcgctgctcacatcctcgacattcttcaagatgcgagagatctacttccac
gaccaggttgaccatgaagagtacaacggcaagctctacggcctcggcgagacgttcacg
gtcgccaacggcattccagaccctggccgtgggggtgcaacgatcgcggagcgagaagat
agaagtctcagcagggatacacagaaccagaactcagcgggtggacagaaccacataggc
atgtcgcttccaacgcctgccatgggcggcgctctaccgactcccttgccgccgaatgca
accttcggccccatgggtgcgaacggtgcatatatacgcacggctattggtgtgggtggc
gggagatag

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