Stereum hirsutum: STEHIDRAFT_59114
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Entry
STEHIDRAFT_59114 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
shs
Stereum hirsutum
Pathway
shs04120
Ubiquitin mediated proteolysis
shs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
STEHIDRAFT_59114
04120 Ubiquitin mediated proteolysis
STEHIDRAFT_59114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shs04121
]
STEHIDRAFT_59114
Enzymes [BR:
shs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
STEHIDRAFT_59114
Ubiquitin system [BR:
shs04121
]
Ubiquitin ligases (E3)
U-box type E3
STEHIDRAFT_59114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
18805698
NCBI-ProteinID:
XP_007304654
JGI:
Stehi1_59114
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MKRLAKLQGPSPSSSSPSPSTSSTPVPTPVPVQKPKPIPAPTPKRSQDAVPVPLPPQKKV
SVAPPKFNYSTWEPGVISSVFRVTLDRDVALKSDNDLVWLKSYAEDSMTDEGPPRLAADA
VEGVVIARLDLDPSAMQVDDDYSPFLARIPSNQTVFEYLTGCWKRLNTSKSALLRRGYPP
ADLKQALALEESMRHLIISYIGIDLMSPEAFPHPPGKAIGAPEFTSMLLSLSSFAASPYA
SSGPAGSSLSPSEIESLLSDIVWRFDPDGELESVLGPVVIGLLHHECLFSPEGIASADSL
WRGVVGGLEVLVANKSVVKMMCMMEEWCANDADAPNFERASLLGPLLRLNVFPTEWPHIA
KTYFTDVEGRPAQDVESARNSLRGTLKSLQSSLFQIFNTIVRTSPECREAFLAFVARVIE
LNIKRAGMQVEAETVSSDSFMTNLQLILFSFVDPFMDASYSKIDRIDRLYYAHTSRLNIK
EETRINATSDEASQWAEANQLAPGAPPPNFISDVYFLTLAMFHYGFLKTVDTFEEYAKDL
DDTKKRLEQAEGDTTWQGTMMAPRMEAYLKQLKEEISKITAAQTAASTQLLDPEVLFKAN
AFVSFVTTWIIRFVDPKRAHPKPMVQLPLPADVPVDWKVLPEYVVEDAINYLVFVVRHHP
QSLELQGRDELLNFTLSFLTSTWYIKNPFLKAKLVEILFFGAWPYRGNQSLLGSNLNASK
VALDHLMRALMHFYIEVEQTGASSQFYDKFSTRYISYILKSVWENQEHRAALRNEAKNNI
EKFIRFVNLMINDVTYLMDESLSELHQIYTIQHEMDQPEWSTRPLQQRRERLSTLGGLER
HASSYVSLGKSTVDMLKLFTAETKEPFMMPEIVDKLAAMLDYNLEALVGPKCKELRVKNM
EKYSFNPRKLLSDVLQVYLNLSDCGEFVKAVAGDGRSYKKELFESAAGTAMRYALKTEGE
IEKLRLFVVMVEEAKATMDAEEELGDVPDEFLDPLMYTVMKDPVILPSSRTVIDRSTIKS
HLLSDSKDPFNRQPLKIEDVVPDDALRTRIQEFLIARRNPALGQSAENTVHLHDGTDQAD
EMTGISANQGEAMDTS
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcttgctaaacttcagggaccttcgccatcctcatccagtccttctccttca
acatccagtacacctgtaccaacgcctgtaccagtccagaagccgaaacctatcccggct
ccaacaccaaagcgctcacaagacgccgtccctgtgcccttaccacctcagaagaaggtg
tctgttgctcctccaaagttcaattactcgacttgggagccaggagtgatcagtagtgtg
ttcagagtcactttggatcgggatgtggcccttaagagcgacaacgaccttgtatggctg
aagtcctatgccgaggattctatgactgacgagggtccgcctcgattggctgccgatgcg
gtcgagggtgtagtcatcgcgcggttagatttagatccttctgccatgcaggtcgacgac
gattactcacccttccttgctcgtattccgagcaatcagacggtgttcgaatatttgact
ggatgctggaaacggctgaacacctcgaaatctgctctgctgagaaggggctatccaccg
gccgatctcaagcaagctcttgcactcgaagagagcatgcgccaccttatcatcagttac
attggaatagatcttatgagcccggaagctttccctcatcctccaggcaaagccattggt
gctccagaatttacttccatgctcctctccctttcgtccttcgccgcttctccgtacgct
tcctcgggacctgcgggctcatccctctcgccctctgagattgaaagcctcctctctgac
atcgtttggcgcttcgacccggatggcgaacttgagtccgtccttggtcccgtcgtcata
ggactcctgcaccacgaatgtcttttctcaccagaaggtatcgcaagtgccgactcgctt
tggagaggcgttgttggtggcctagaggtgttggtagccaacaaaagcgtggtgaagatg
atgtgtatgatggaggaatggtgcgcaaatgatgcggacgcgccaaactttgaacgggct
agtttgcttggaccgctattgaggttgaatgttttccccacggaatggccacatattgcc
aagacatactttaccgacgtcgagggcaggccggcacaggacgttgaaagtgcacgcaac
agtctcagggggacattgaaaagcctccagtcgtcgctcttccaaatatttaacactatc
gtgcgcacgtcgcccgaatgtcgagaagcattcctcgcatttgtcgctcgcgtcatcgaa
ttgaacatcaagcgagctggcatgcaggtcgaggcggaaacagtctcgtcagatagcttc
atgaccaacttacagctcatactattcagctttgtcgatcccttcatggacgccagctac
tctaagattgaccgcatcgaccgcctctactacgcgcatacctcccgactcaacatcaag
gaggaaactcgcatcaatgccacctcggacgaagcctcacagtgggccgaagccaatcaa
ttagccccgggtgctccaccgcccaacttcatttcggacgtgtactttttgacgttggcg
atgttccattacggcttcttgaagaccgtggataccttcgaagaatacgcgaaggacttg
gatgatacgaagaaaaggctggagcaagcggagggggacactacttggcagggcaccatg
atggcaccaagaatggaggcttacctcaaacagctcaaggaggagatctcgaaaatcacg
gctgctcaaacagccgcctcaacacagctccttgaccctgaagtcctcttcaaagcgaac
gccttcgtttctttcgtaacaacatggattatccggttcgtggaccccaagagagcgcac
cctaagccgatggtacagcttccactcccggcagatgttcctgttgactggaaggtgctc
cctgaatatgtcgtcgaagatgcaatcaactacctcgtctttgtcgtccgtcatcacccg
caaagcctcgagctccagggccgtgacgaactcctgaacttcacactctccttcctcacg
tcaacatggtacatcaagaaccctttcctcaaagccaagctcgtcgagatattgttcttt
ggtgcttggccttatagaggcaatcagagcttgttggggtcgaatttgaatgcgagcaag
gtggcgttggaccatttgatgagagcgttgatgcacttctacatcgaggttgagcagacg
ggtgcaagctcgcaattctacgataaattcagtacgcggtatatctcatacatattgaaa
tcggtgtgggaaaatcaagagcatcgggctgctctgcggaacgaagccaagaacaacatt
gaaaagttcatccgcttcgtcaacctcatgatcaacgacgtgacctacctcatggacgag
tctctcagcgaacttcaccagatttacaccatccagcacgagatggaccaacccgaatgg
tccacccggcccctccaacaacgtcgggaacgcctaagtaccctaggcggactcgagcga
catgcgagctcctacgtctcgctcggaaagtccaccgttgacatgctcaagctgttcact
gccgagacaaaggagcccttcatgatgcccgagatcgtggacaagctcgcggcgatgctg
gattacaacctcgaagccctcgtcggaccaaaatgcaaggaactgcgcgtgaagaatatg
gagaagtattcgttcaacccgaggaagctgttgagcgacgtgttgcaggtgtatctgaat
ttgagcgactgtggcgagtttgtgaaggctgtggcgggtgatgggcggagttataagaag
gagttgttcgagagcgcggcggggacggcgatgaggtatgcgttgaagacggagggggag
atcgagaagttgaggttgtttgtggtcatggtcgaggaggcgaaggcgacgatggatgct
gaagaggagttgggagatgtgccggatgagttcttggatccgttgatgtacaccgtcatg
aaggatccggtcattcttccgtcttcgaggacagtcattgaccggtcgactatcaagtct
catttgttgtccgactcgaaggacccgttcaacagacagcctttgaagatcgaggatgtc
gttcctgacgatgccttgaggactcgaatccaagagttcctcatagcgagaagaaaccct
gctttgggccaaagtgccgaaaacactgtgcacctgcacgatggtacggaccaggctgat
gaaatgactggtattagtgccaaccagggagaggcgatggacacctcgtag
DBGET
integrated database retrieval system