Stereum hirsutum: STEHIDRAFT_59928
Help
Entry
STEHIDRAFT_59928 CDS
T03127
Name
(RefSeq) carotenoid oxygenase
Organism
shs
Stereum hirsutum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPE65
Motif
Other DBs
NCBI-GeneID:
18805757
NCBI-ProteinID:
XP_007305246
JGI:
Stehi1_59928
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MKDDSKKSHPYLTGNYSPVRKEWPLTSCQYMGTIPPELYGGQYVRNGANPFHVDKDSWDL
NPRDYHWFDGDGMLTGVYFQRLPSTSEASNAQTISPHFVNAYVLTDLYLHARTSPYLRRP
LLPSISSFLNPLAGTLGVILSVLRAVFIVVLSHISAFLSRQQSYSVTKISVANTSIVYHD
GRALATCESGPPMRVLLPSLTTVGWFDGTHGDGDDVRVNEDPSFGAKPGLLGWMDQWTTG
HPRVDPCTHEMILYHSTVLPPYISYTIIPPSSPSTIPFQPAHPRLRNAPIPGVHSPKLSH
DFACTRTHTIILDLPLYLDPLNLLSSFLPSRKKNQVMHYQDDEFARFGVFPRYEPHKVRW
FEDVEGGACCIFHTVCAWDEMDPRGERVVAVNLLACRLDSAALVYSAGNLATPRTPRDDS
TSGLAVDDKEGKCELYYYRFDLSDPDANNITHAFPLSTIPFEFPVVPPSAGMGSATTSSR
RFRSPRFVYGCSMQHGTFGAALGGSNARIDAIAKVDVHDLIERGAHRHYDASKSRPAIDQ
RTVQEILGTADTSVDKGAITIFTFPPGHCGSEPSFCPRANAISEDDGYLIFYVFDERQLE
RGLSLDEARSELWVVDARNMKDVICRVELPQRVPYGLHAHFFTEDEILGQRGVHSLRSLP
AGVEKNDTAGL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgacagcaagaaatcacatccctatctcacaggcaactattcccctgttcgc
aaagaatggccgctcacttcctgtcaatatatgggcaccataccgccagagctttacggt
ggacagtacgtccgcaacggtgccaacccatttcacgtcgacaaagactcctgggacttg
aatccccgagactaccactggttcgacggagacggcatgctcactggcgtttatttccaa
cgactaccctccacctccgaagcctcgaatgcacaaactatatccccgcattttgtcaac
gcttacgtcctcacagatctatatcttcatgctcgtacctctccatacttgaggagaccc
cttctgccctccatatcctccttcctcaacccgctggcgggaacactcggcgtcatactc
tcagttcttcgtgctgtcttcatcgtcgtcctctctcatatctctgccttcctctcgaga
caacagtcctattcagtgacgaagatcagtgtcgcaaatacatccattgtttaccacgac
ggtcgtgcacttgccacttgcgagagtgggcctcctatgcgtgtactcttgcccagcttg
actacagtaggttggtttgatggcacgcatggcgatggtgacgacgtacgtgtcaacgag
gaccccagctttggagcaaagcctggccttcttgggtggatggatcagtggacaacgggt
catcctagggtggacccgtgcacccatgaaatgattctttaccattcgaccgtcctccct
ccctatatctcctatactataatacccccctcgtcgccatctaccataccttttcaacct
gctcaccctcgcctccgcaacgcaccaatcccaggagtgcactcacccaaactatcccat
gatttcgcatgcactcggacacataccatcatcctcgatctgcccctctatctcgaccca
ctcaacctcctctcctcgttcttgccctcgaggaaaaagaaccaagttatgcattaccaa
gacgacgaattcgcccgatttggcgtctttcctcgatatgaacctcacaaagtgaggtgg
tttgaagacgttgagggcggcgcgtgctgtatcttccatacagtgtgtgcatgggatgag
atggatccgagaggcgaacgagttgtcgccgtgaatctcctcgcttgtagactcgactcg
gccgcactggtgtactcggcaggaaacctcgctactccccgaactcctcgagatgattcg
acctcgggtctcgcggtcgatgacaaagaaggcaaatgcgagctttactattaccggttc
gacctttcagatcccgatgccaataacatcacacacgctttccctctttccaccatcccc
ttcgaattccctgttgtccctccgagcgctggcatgggcagcgccacgacatcctcacga
cggtttaggagccctcggttcgtgtatgggtgtagcatgcaacatggtacgtttggcgct
gcgttgggtgggtcgaacgccaggatcgacgccattgcaaaggtcgatgtgcatgatttg
attgaacgaggggcacatcgacactatgatgcgtcaaagagccgacctgcgatcgaccag
cgcaccgtacaggagatactgggaacggcagacaccagtgtcgataagggtgccatcaca
atcttcaccttcccgccagggcattgtgggtccgagccttccttctgccctcgtgcgaat
gcaatatcggaagacgacggatacctcatcttctatgtgttcgacgaaaggcagctggaa
cgaggcctatctctggacgaggcgaggagcgagttatgggtcgtggatgcgaggaatatg
aaggacgtgatctgtagggtggagttaccgcagcgagtaccctatgggttgcatgctcat
ttcttcacggaggatgagattctgggtcagcgtggagtccattcgttgcggtcacttccg
gccggcgttgaaaagaatgacactgcgggattatag
DBGET
integrated database retrieval system
