Stereum hirsutum: STEHIDRAFT_63191
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Entry
STEHIDRAFT_63191 CDS
T03127
Name
(RefSeq) polyadenylate-binding protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_63191
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_63191
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
STEHIDRAFT_63191
Spliceosome [BR:
shs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
STEHIDRAFT_63191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
18806027
NCBI-ProteinID:
XP_007307293
JGI:
Stehi1_63191
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MNPMGMSGAAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNY
GFVEYMDMRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVND
DVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRV
NWANQKTQGGLPVSGGPTASPTRTGAGGAPAPINFQGGPLSYESVVQQTPAFNTTVYVGN
LVPYCTQSDLIPLFQSIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQLVHGRPIK
CSWGKDRADGGAAGTAPMSPATGAAPYGNMPMYGMPQPNTYGQYGFGAYGGFPNQGGAGA
TAGGAAPGMPQAAPGAPAAGVAGAGAVDPAAAAAGGAQGQWAGGDPSSYYSNYWGGKFLF
LL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaatgggcatgtctggtgcagcggaggcccctagacgggctcacctctacgtt
ggcaacctcagcccccgagtgaccgagtacatgctcaccgagatcttcgccgtcgccggg
cccgtccagcacgtcaagatcattcccgaccgcaactaccagcacggcggcctcaactac
ggcttcgtcgagtacatggacatgcgtgccgccgagaccgctctccagaccctcaatggc
cgcaaaatcttcgacaccgagatccgcgtcaactgggcttaccagggccaacaaaacaag
gaagacacttccaaccacttccacgtcttcgtcggcgacctttcccccgaggtcaacgac
gacgtcctcgccaaggcgttcgccgccttcggtaccatgtccgacgcccgcgtcatgtgg
gacatgaactctggcaagtctcgcggttacggtttcctcgcctttagggacaagaccgat
gccgagcaggccatcgccaccatgaacggtgaatggctcggatcccgcgccatccgcgtc
aactgggccaaccaaaagacccagggcggcttgccagtcagtggtggccccacggctagc
ccaactcgcactggtgctggcggtgctccggcgcctatcaacttccaaggcggtcccctc
tcttacgagtccgtggtccagcagactcccgccttcaacaccaccgtttacgttggcaat
ctcgtcccgtactgcacccagtccgacctcattcccctcttccagtctatcgggtatctc
tccgagattcgcatgcaggccgaccgtggtttcgcgtttgtcaagctcgacactcacgag
cacgccgccatggccatcgttcagttgcagggtcagttggttcacggcaggcccatcaag
tgcagctggggtaaggacagggcggatggtggtgctgcgggtaccgctcccatgagtcct
gctacgggtgctgcgccttacggtaacatgcccatgtacgggatgccccaaccgaacact
tacggccagtacgggttcggcgcctacggaggcttccccaaccagggtggggctggggct
acggctggaggtgccgctcctggaatgcctcaggccgctcctggtgcgcctgctgcaggt
gttgctggtgccggggctgtcgaccccgctgccgccgcggcgggtggcgcccagggtcag
tgggccggaggagaccccagctcgtactactccaactactggggcggtaagttccttttc
ttgctctag
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integrated database retrieval system
