Stereum hirsutum: STEHIDRAFT_63905
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Entry
STEHIDRAFT_63905 CDS
T03127
Name
(RefSeq) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
shs
Stereum hirsutum
Pathway
shs00040
Pentose and glucuronate interconversions
shs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
STEHIDRAFT_63905
Enzymes [BR:
shs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
STEHIDRAFT_63905
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18806087
NCBI-ProteinID:
XP_007307791
JGI:
Stehi1_63905
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
TSGGSGGTSTTVTTLDELTSAVEGSDSKIVIISGTITGNDVVRVGSNTTVLGAAGASLEG
VGLRVYQESNVIIRNIAISKVLAEAGDAIGIQEASQVWVDHVDLSSDMDHDKDYYDGLLD
ITHGSNGVTVTNSKLHDHWKASLVGHSDSNGDEDVAITVTYANNWWTNLNSRTPSFRFGT
GHIYNNYYESNSDGINTRDGAQLLVENNVFVSVDKPLYSVDEEGYAVSNGNDFGDGEDTA
DAGTFTTAPYDYDLLDATEVAASVMASAGATLSF
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
acctctggcggctccggcggtactagcaccactgtcaccacgctcgatgagttgacatct
gctgtcgagggctctgactccaagatcgttatcatctccggtaccattactggtaatgat
gtcgtccgcgttggttctaacaccactgtcctcggtgctgctggtgcttcgctcgagggc
gttggtctccgcgtctatcaagagtcgaatgtcatcatccgtaacatcgctatctccaag
gtactcgcggaggccggagatgctattggtatacaggaggcatctcaagtttgggttgac
catgttgatctgtcgagcgacatggaccacgataaggattactacgacggtctcctcgac
atcacacacggctcgaacggtgttactgtcaccaactcaaagttgcatgatcactggaag
gcttcgctcgtcggccactctgacagcaatggagatgaggatgtcgctatcaccgtcacg
tatgctaacaactggtggacgaacctgaactcgaggactccttcattcaggtttggcacg
ggacatatatacaataactattatgagtcaaacagtgacgggattaacactcgtgatggt
gcacaactcctcgtcgagaataacgtcttcgtgagtgtcgacaaacctctctactcggtc
gacgaagaaggctacgccgtctccaacggcaacgacttcggtgacggcgaggataccgct
gacgctggtactttcaccaccgctccctacgattacgatctgttggacgcgactgaggtg
gcggcgtcggtgatggcgagcgcgggtgcgacgttgtccttctaa
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