Stereum hirsutum: STEHIDRAFT_65505
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Entry
STEHIDRAFT_65505 CDS
T03127
Name
(RefSeq) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
shs
Stereum hirsutum
Pathway
shs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
STEHIDRAFT_65505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_65505
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
STEHIDRAFT_65505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
18806219
NCBI-ProteinID:
XP_007308737
JGI:
Stehi1_65505
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MYGKEKEDNDLDTNVDPGFCKWFSTLPPKSPETDGTVRLFARNNGEFYTAHGADALYIAQ
HVFHTNSVLKYLGAGGRTGGLPSVNLRDSVAKTFLRDALTIKQLKVEIWMPEGTGKKVSK
FRLDKEASPGNLQAVEDLLFVDTDVMSAPMVMAIKLASTPAVPGAPKSKSKTVGIAFADS
SVRQLGVSDFVDNDLFSNTETLVVQLGVKEALVTTGTASGTTDRDFDLRKLKEVLDRCGV
VITERKPSEFTAKNIQEDLTRLLTKPDAVPSATGDASSSIPQLSLPTAPAALTALLTYLN
LLADTSNHGAWTIYTHDLGQYMRLDASALRALNLVEGTATRNTTLLGLLNKCKTAQGTRM
LGSWLKQPLVNRHEILKRQDLVETFVDDLNARRTLQDDFMKLMPDMHRICKRFQKSVASL
EDVVRVYQAVLKLSGLIENLKAVDYKSDRSRDLIQETYLEHFEKHATSLSNYADMVEQTL
DLSQLEQHKYVIKPDYDQKLMNIASALKEALEGLDREHKEVGRDLGLELDKKLRLENTQT
YGYCFRLTKNDARAINGKRKYIELGTVKAGVHFTTATLKEHATDYQESTERYSRTQSSLV
KEVVSIAATYAPVLEALNGVLAHLDVILSFAQVAANAPEAYVKPTIVDMGTGDLILKEAR
HPCLEVQDDMSFIPNDVEMIKNESEFQIITGPNMGGKSTYIRQVIGVIALMAQTGSFVPC
SEAQIPIFDSILCRVGAGDSQLKGISTFMAEMLETATILKSASKDSLIIIDELGRGTSTY
DGFGLAWAISEHIASQIHAFCLFATHFHELTALDQELSHVKNLHVVAHVSKADETSKSKE
RDITLLYKVEPGVCDQSFGIHVAELANFPESVVRLAKRKADELEDFNTDDASNSEADLPP
EVTEEGIKIVEEMLKTWASRTSVYPAQLDDGDIVMDDAEMSPEKQVEELRECMKEFAPRI
EGNAWVQKLLATL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggaaggagaaggaggacaatgatctcgacacgaatgttgaccccggcttctgc
aaatggttctccacccttcctccaaaatcaccagagactgacggcacagtacgcctgttc
gcgcgaaacaacggagaattttataccgcgcacggtgccgacgcgctctacattgcgcag
catgtctttcatacaaactccgtgctcaagtatctcggcgcaggaggacgaacgggtgga
ctgcctagcgtaaaccttagggacagtgtggcaaaaacattcttgagagatgctttgacg
atcaagcagctcaaagtagagatatggatgccagaggggacaggaaagaaggtatcgaag
ttcagactagacaaagaggcttcgccaggaaacttacaggcggtagaggatctgctgttt
gtggatacagatgtgatgtccgcacctatggtcatggctatcaagctagcgtcaactcca
gccgttccaggggctccgaagtcgaagagcaagactgtcggtattgcttttgcagactca
agtgtccgtcagcttggcgtatctgactttgtagacaacgatctattctcgaataccgag
accctcgtcgtccagctgggcgtgaaggaggctctggtcaccaccgggacagcgagtggc
acgacggacagagacttcgacctcagaaagctgaaagaagtgttggatcggtgtggcgta
gtcatcaccgagcgaaaaccaagcgaattcaccgctaagaatattcaagaagacctcaca
agacttctgacaaaaccagacgccgttccatcagccacgggcgacgcatctagttccatt
ccccagctcagccttccaacagcgcctgcagctctgaccgctcttctgacttatctgaac
ctccttgccgacacttcaaaccatggagcatggactatctatacgcacgatctcggccaa
tatatgcgcctagacgccagtgctctccgggctctaaacctcgtcgaaggcacggcgacc
aggaatacgactttgctgggattgttgaataaatgcaagacggcgcaagggacgaggatg
cttggaagttggctgaagcaaccgcttgtcaatcgccacgagattctgaaacgacaggat
cttgtagagacctttgtcgatgacctgaatgcgaggcgtacactccaagatgacttcatg
aaactcatgcccgacatgcaccgtatttgtaaacggttccaaaaatccgtggcgtccttg
gaggacgtcgtgcgcgtttatcaggctgtgctgaagctcagtggcttgatagagaacctg
aaggcggtagattataaatctgaccgaagtagagacctcatccaagagacctacctggaa
catttcgagaaacacgccacctccctgtccaactacgccgacatggttgaacagacgctt
gacctctcccaactcgaacagcataaatacgtcatcaagccagattacgaccagaaactc
atgaacatcgcctccgctttgaaagaggcgctcgagggtttggatcgggagcataaagag
gtcgggagggaccttggtctggagctggataagaagttgaggttggagaacacacagact
tatgggtattgcttcaggttgactaagaacgacgcgagggccatcaacggaaagcggaag
tacatcgaactagggactgtcaaggccggtgtacatttcacaacagccactctcaaggaa
cacgcgaccgactatcaggagtcgacggagaggtactcgaggacacaaagcagcctcgtg
aaagaggtcgtcagcattgccgcgacttatgcaccggtattggaggccctgaatggcgtg
ctagcgcatttagacgttatcttgagcttcgcacaagtcgccgccaacgctccagaagca
tatgtcaagcctactattgtcgacatgggaaccggagaccttatcctgaaggaagcccgc
catccttgtttagaagtccaagacgacatgagttttataccgaacgatgtcgagatgatc
aagaatgagagcgagttccagatcatcaccggaccaaacatgggtggcaaaagtacatac
attcgccaggtaatcggcgtcatcgccctcatggcccaaaccggctccttcgttccttgt
tcagaagcccaaatcccgatcttcgactctattctttgtcgtgtgggggcaggagacagt
cagctcaagggaatttcgacattcatggcggagatgttggagaccgctaccattctgaag
tctgcgtcaaaggattccttaatcatcatcgacgagctgggaaggggaacctcgacatac
gatggctttggtcttgcgtgggctatttcagaacatatagcttcacagatccacgccttc
tgcctcttcgctacccacttccacgaattgacggcacttgatcaagagctttcgcacgtc
aagaatttgcacgtagtggcgcacgtttctaaagccgatgagacgtcgaagtcgaaggaa
agagatatcaccctgctgtacaaggtcgagcctggcgtctgcgatcagagctttggtata
catgtggccgaacttgcgaacttcccagagtccgtggtcaggctggccaagcggaaagcc
gacgaactcgaagacttcaacaccgacgacgcctcaaattcagaggcagacctcccacca
gaagtcacggaagaaggcatcaagatcgtcgaggagatgctcaaaacctgggcctcacga
acatccgtataccctgcacagctcgatgacggagacattgtgatggatgacgcagagatg
tcgccggaaaagcaagtcgaggagttgcgagaatgtatgaaggaattcgcgccacggatt
gagggtaacgcgtgggtgcagaagttgttggctactctataa
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