Stereum hirsutum: STEHIDRAFT_68785
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Entry
STEHIDRAFT_68785 CDS
T03127
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
shs
Stereum hirsutum
Pathway
shs03018
RNA degradation
shs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
STEHIDRAFT_68785
09123 Folding, sorting and degradation
03018 RNA degradation
STEHIDRAFT_68785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_68785
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_68785
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
STEHIDRAFT_68785
mRNA degradation factors
5'-3' decay
Lsm complex
STEHIDRAFT_68785
Spliceosome [BR:
shs03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
STEHIDRAFT_68785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
18806461
NCBI-ProteinID:
XP_007310677
JGI:
Stehi1_68785
UniProt:
R7RZ52
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
PQGGPPSGDKPKREAILDLSKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVQEEVQ
EPTPHTRSLGLTVLRGPTITLLSPVDGLEEIANPFAAQE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
ccacagggagggcccccctcaggagacaaacccaaacgcgaggccattcttgacctctcc
aaatacgtgaatgaacgtatcagagtcaagttcactggcggcagggaagttaccggtgtg
ttgaagggctacgatcagctgctgaacctcgtgttggatgaagtacaggaggaggtacaa
gagccaacaccacacacacggtctctaggacttacagtcctgcgtggcccaacgataacg
ctcctcagtcctgtcgacggcctcgaagagatcgccaatcccttcgcagcccaggagtag
DBGET
integrated database retrieval system
