Stereum hirsutum: STEHIDRAFT_70354
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Entry
STEHIDRAFT_70354 CDS
T03127
Name
(RefSeq) nucleoporin-interacting protein NIC96
KO
K14309
nuclear pore complex protein Nup93
Organism
shs
Stereum hirsutum
Pathway
shs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
STEHIDRAFT_70354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_70354
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
STEHIDRAFT_70354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
FliG_C
Motif
Other DBs
NCBI-GeneID:
18806629
NCBI-ProteinID:
XP_007298120
JGI:
Stehi1_70354
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MAADSLASLLTSSKALTSHLSRPDLPQLNLSLDQIEAQSRRLVSRQPGAATDSGRANYLL
AQAHVDAPALANAITQLNTSTTFSPLRPLQDTDIASYLRHAHEQNIISTIEEARRETQED
FYRVLEDRSRQDWETRKKRVFEELGGRVGGDNPAVAQYRKSHSGKSAFAMSTGPSPSLQM
QSKMMAYDRPITELNQARLRGVSYPIIHALLHSSLALHPDRTNPMSQLFHLLSKITSEPP
SIPPLSHSSAHILNAPLFERKHARAYLNDPSSRDALDLRRQIAKGSREALEEQYFDVLER
TVHSRPTEARLGGDPSVSNKVRAFLLVRFYRGGEWQERIELVAGQPLWAKLFYLVRTGYG
DEALREAVQHQAAIEHREDSFVMHFRTWIESPDRRLPKPHRDHIQSIYNAHLLHSSTVDP
FKLALYKLMGRLDPSRRSVPLVTATTEDWLWFQLSMLDEDEEGSGLNSLGEVLMGYGERY
FEGGGASAGAEGQAQAKGRTGLWASVLLMTGQFERAVAALWDHPETEIEAVHMAIALSYH
GLLRVPSRTDTAELTLSFLPNGQVALNLPTLIWRYVRQFVKMDGKEALQYVYTVTLNADQ
PGVGEEQVEQAWEMVRRIITLANAGPAWDELVGGFRTDGNKFSGVIEHFAPLLKLPSAES
FNAQILIPAAQHSSSSDRPLEAIKLYNLAGDYDTVVACLAQALGASIGQPNAGGERGKAV
EGTAREIVRHYVRMNRGAGQCREAVEKLLKIREAMGYKEEGRVDLALELLESTEIVTLDG
DVGKINKKADEFKNQHESLQRNIEMFLPLVMDCVVSVYRKIKTSNAPDSARQATLATLRK
KSKSVIMFAGFLKYRLSPDVYNYLARLDVEVSL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgattcgcttgcctcgttgctgacctcgtcgaaagcgctcacgtcgcacctg
tctcggccagatctcccacaactcaacctttctctagatcaaattgaggcccagtcacga
cgactcgtttctcgtcaacccggagctgcgacagattctggacgcgcaaattacctgctc
gcacaagcacatgttgatgccccagcactagcaaacgccataacccaactgaacacatca
acgactttctctccactacgacctctccaagacaccgacattgcaagctacctccgccat
gcgcacgaacaaaacatcatatccacgatcgaagaggcgcggcgagagactcaggaagac
ttctaccgcgtgctggaggatcggtcaaggcaagactgggagacaagaaagaagagggtc
ttcgaggagcttggaggacgcgtcggtggtgataacccggccgtggcacagtacaggaag
agtcattcgggcaagagcgcatttgcaatgagcacaggccccagcccaagcctccaaatg
caaagtaaaatgatggcctacgaccgccccatcaccgagttgaaccaagcccgcctccgt
ggcgtctcctacccaatcatccacgccctcctccattcctctcttgctctccacccagac
cgcacgaacccaatgtcccagctcttccacctcctctccaaaatcacctctgaacccccc
tccatcccccctctctcccactcctccgcccacatcctcaacgcaccccttttcgagcgc
aaacacgcccgcgcctacctcaacgacccctcctcccgcgacgccctcgacctccggcgt
caaatcgccaaaggctcccgcgaagccctcgaagagcaatacttcgacgtcctcgaacgc
accgtgcactcccgccccaccgaggccaggctcggtggcgacccgagcgtctcaaataag
gtccgcgctttcctgttggtccggttctataggggcggggagtggcaggagaggatcgag
ctggtggcgggccagccgttgtgggcgaagttgttttatttggtgaggacggggtacggg
gatgaggcgttgagggaggcggtgcagcatcaggctgctattgaacatagggaggatagc
tttgtgatgcattttaggacgtggatcgagtcgcctgatagacggctaccgaaacctcac
cgagaccatatccaatcgatttacaatgcccatctcctccactcctccaccgtcgacccg
ttcaaactcgccctctacaaactcatgggccgtctcgacccctcacgcagatccgtcccc
ctcgtcaccgcaacgaccgaagactggctctggttccagctttcgatgctggacgaagat
gaggaaggatcgggattgaactcgttgggcgaggtattgatggggtacggagagaggtat
ttcgaaggtgggggggcgagtgcgggggcggagggacaggcccaggcgaagggcaggaca
gggttgtgggcgagtgtcttgttgatgaccggacagttcgaaagggctgtcgctgcgctc
tgggaccatccagaaacggagatcgaggcggtccatatggctatcgctctctcatatcac
ggcctcctccgtgttccttctcgaacggacaccgcagaactaacactctccttcctcccc
aacggccaagtggcactcaacctccccacgctcatctggcgctacgttcgccaattcgtc
aaaatggacggcaaagaagcgctccaatacgtctacaccgtcacgctgaacgccgatcaa
cctggcgtaggcgaggagcaggtcgagcaggcatgggagatggtccggcggatcatcacc
cttgcaaatgcaggacctgcgtgggacgaactcgtcggtgggttcaggaccgacggtaat
aaattcagcggcgtgatcgaacacttcgccccacttctcaaactcccctccgccgaatcc
ttcaacgcccaaatcctcatccccgccgctcaacactcctcctcctctgaccggcccctc
gaggccatcaagctctacaacctcgcgggcgactacgacaccgtcgtcgcgtgtctcgca
caggcgctcggtgcgtccatcgggcagccgaacgcggggggcgagagagggaaggcggtg
gaggggacggcgagggagattgtgaggcattatgtgaggatgaataggggggcgggacag
tgtagggaggcggtggagaaactgttgaagattagggaggcgatggggtataaagaggag
gggagggtggatttggcgttggagctcctggagagtacggagatcgtcacgctcgacggc
gatgtcggcaagatcaacaagaaagcggacgagttcaagaaccagcacgagtctctccag
aggaatatcgagatgttcttgccgctcgttatggactgtgtcgtctcggtataccgcaag
atcaagacgtcgaacgcaccggattcggcgcgacaggcgacgttagctactttgaggaag
aaatcgaaatcggtgatcatgttcgctggcttcttgaagtacaggctgtcgccggatgtg
tataattatctagcgaggctggatgttgaggtttcgttgtag
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