Stereum hirsutum: STEHIDRAFT_71046
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Entry
STEHIDRAFT_71046 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
shs
Stereum hirsutum
Pathway
shs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STEHIDRAFT_71046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_71046
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
STEHIDRAFT_71046
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
STEHIDRAFT_71046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
Motif
Other DBs
NCBI-GeneID:
18806666
NCBI-ProteinID:
XP_007298157
JGI:
Stehi1_71046
LinkDB
All DBs
Position
Unknown
AA seq
185 aa
AA seq
DB search
MASDCLLPGQPVPLPKGPAPLLGSGIYSKDGLARASVVGVPHYDASTLTISRVRPHPPTP
SSLVLGSVTRLSPQQAMVSITVVDGVPLPAGEEFTGVIRTQDVRATEKDKVKIGDCFRGG
DVVKGLVISLGDARSYYITTARNDLGVIFATSEAGGTMEPVSWQEMRCPKTGKLEKRKCA
KPEGL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagactgtctcctccctggccagcccgtcccccttccaaagggccctgctccc
ctcttgggcagcggaatatactccaaagatgggcttgcgagagcgtcggtcgtcggcgtg
ccacactacgatgcatctacattgacaatttcgcgtgtgcgcccacacccacccacaccg
agctcgttagttcttggttccgtgacgagactctcgccacagcaagctatggtctctatc
accgtcgttgatggcgttccattacctgccggcgaagagtttactggtgtgatcaggacg
caggacgtccgtgcgaccgagaaggacaaggtcaagatcggtgattgttttcgcggtgga
gatgtcgttaagggtttggtcatctctcttggtgatgctcgtagttactatatcactaca
gctcgcaatgatctcggtgtcatttttgccacgagcgaggcaggtggcacgatggaacct
gtgtcatggcaggaaatgcgctgtccgaaaacaggtaaactcgagaaacgaaaatgcgca
aagccagaaggcttgtaa
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integrated database retrieval system
