KEGG   Stereum hirsutum: STEHIDRAFT_71527
Entry
STEHIDRAFT_71527  CDS       T03127                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
shs  Stereum hirsutum
Pathway
shs03018  RNA degradation
shs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    STEHIDRAFT_71527
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STEHIDRAFT_71527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shs03019]
    STEHIDRAFT_71527
   03041 Spliceosome [BR:shs03041]
    STEHIDRAFT_71527
Messenger RNA biogenesis [BR:shs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     STEHIDRAFT_71527
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     STEHIDRAFT_71527
Spliceosome [BR:shs03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    STEHIDRAFT_71527
SSDB
Motif
Pfam: LSM KOW7_SPT5 LSM14 LSM12_LSM
Other DBs
NCBI-GeneID: 18806690
NCBI-ProteinID: XP_007298181
JGI: Stehi1_71527
LinkDB
Position
Unknown
AA seq 85 aa
MASQILPLELIDRCIGSRIWVIMKNEREFTGTLLGFDDFVNMVLEDVTEFEITSAGRKKT
ALRQTLLNGNNICMLVPGSNGPEDP
NT seq 258 nt   +upstreamnt  +downstreamnt
atggcctctcagatcctacctcttgaactcattgatcggtgcattggttcgaggatatgg
gtcatcatgaagaacgagcgcgagttcactggaactttgctcggattcgatgacttcgtc
aacatggtgctggaggacgtgaccgaatttgaaattacctctgctggacgcaagaagaca
gcactcagacagacactgttgaacgggaataatatctgcatgctcgtccctggaagtaat
ggacctgaagacccatga

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