Stereum hirsutum: STEHIDRAFT_71527
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Entry
STEHIDRAFT_71527 CDS
T03127
Name
(RefSeq) Sm-like ribonucleo protein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
shs
Stereum hirsutum
Pathway
shs03018
RNA degradation
shs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
STEHIDRAFT_71527
09123 Folding, sorting and degradation
03018 RNA degradation
STEHIDRAFT_71527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_71527
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_71527
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
STEHIDRAFT_71527
mRNA degradation factors
5'-3' decay
Lsm complex
STEHIDRAFT_71527
Spliceosome [BR:
shs03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
STEHIDRAFT_71527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
KOW7_SPT5
LSM14
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
18806690
NCBI-ProteinID:
XP_007298181
JGI:
Stehi1_71527
LinkDB
All DBs
Position
Unknown
AA seq
85 aa
AA seq
DB search
MASQILPLELIDRCIGSRIWVIMKNEREFTGTLLGFDDFVNMVLEDVTEFEITSAGRKKT
ALRQTLLNGNNICMLVPGSNGPEDP
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcagatcctacctcttgaactcattgatcggtgcattggttcgaggatatgg
gtcatcatgaagaacgagcgcgagttcactggaactttgctcggattcgatgacttcgtc
aacatggtgctggaggacgtgaccgaatttgaaattacctctgctggacgcaagaagaca
gcactcagacagacactgttgaacgggaataatatctgcatgctcgtccctggaagtaat
ggacctgaagacccatga
DBGET
integrated database retrieval system