KEGG   Stereum hirsutum: STEHIDRAFT_80361
Entry
STEHIDRAFT_80361  CDS       T03127                                 
Name
(RefSeq) hypothetical protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
shs  Stereum hirsutum
Pathway
shs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STEHIDRAFT_80361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shs03019]
    STEHIDRAFT_80361
Messenger RNA biogenesis [BR:shs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     STEHIDRAFT_80361
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     STEHIDRAFT_80361
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 18807148
NCBI-ProteinID: XP_007304688
JGI: Stehi1_80361
LinkDB
Position
Unknown
AA seq 684 aa
MPPRNNMNVNVGLAGGALGGGGLGSAGLGGMPGYPGSMGAGAGGMGMRPQPSPGFPQQRG
AGQAFPFNTGLGQQQPHGLHQQQQSNQQQHGGNPGLPPHLQGPTAQNPNINASNAASSGA
ASDVGLDPSDFPALGSTPASVHASALNSGLATPGTANGSYASQAGTTPGSGVQGGQGQTN
GRERDQGRDFGPDDFPALGGGQSTQQQQQQVQQAGQQDHSHPHPPGLNGVHTAERQNSLG
MGGQQQQPGLLNLGPGGRGQQALQSESEKQRNYALKLNSASHAAWNNPSNGPSGTNPLNP
PPSQTPAPVVGGAGFPGTLSSLQNGSHPPTSNQAPQSQPNAQNQNNHLGGPPGVPPPPSQ
QVPQPQQPQPSQQVPPQQATQGPPQPPATSHTPGPAQHFAQDQAQQQGQQQQRPGTTVNN
VNVVPQTPAQQVLVSAADRWGLLGLLAMIKNADLDRGLLSVGTDLGTMGLDMQAQGNLYS
TFITPWADSSAAHTVEPDFHLPTCYNVQPPPPGPSKAAAFSDETLFFMFYSSPRDALQEV
AAQELYNRNWRYHKDLRLWLTKESGTSPSQKVAGGEHGTYTFWDPDGWGKERKDMTVLYS
DLEEKNAPVFAPGAALTLNGPAGAQQQQGQAGVIGAQAGAGGMQQGGQGQMQGQQGGMGG
LGGVGGMMAMGQRGAFQGVGMAAM
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgccaccacggaacaacatgaacgtcaacgtcggtctcgctggcggagcgcttggcggc
ggcggactgggtagcgcggggttgggtggtatgcctggctatccgggctcgatgggagca
ggtgcaggagggatgggaatgaggcctcagccttcgccggggtttccacagcagagaggt
gctggtcaggccttcccgttcaacaccgggctcggacaacagcaaccacacggcctacac
cagcagcaacagtcgaatcagcagcagcacggcggcaatcctggactaccgccacatctc
caaggcccgacggcacagaatccgaacatcaacgcgtcgaatgctgcctcgtcgggtgcg
gcgtcggatgttggactggacccaagtgactttcctgcgctaggatcgacacccgcctcc
gtacacgccagcgcgcttaactcgggactcgcaactccgggaacggcaaatgggagttac
gcgtcgcaggctgggacaaccccgggtagtggtgtgcagggcggacaagggcagacaaat
ggacgggagagggatcaagggagagattttgggccggacgattttccagcgctcggcgga
ggtcagtcgacgcagcaacaacaacaacaggttcagcaggctggtcaacaagatcattca
cacccgcatccacccggtttgaatggtgtgcacacggcggagaggcagaattcgttagga
atgggtggacagcagcagcagccgggattgttgaatttgggaccgggaggtagaggccag
caggcgttgcagagcgagtcggaaaagcagaggaattacgcgctcaagctcaactcagca
tcgcatgctgcttggaacaacccatccaacggaccctcaggcacgaatcccctcaacccc
ccaccatcgcaaacacccgcacccgtcgtgggaggcgcaggcttccccggcacactatcc
tctctccaaaacggctcgcatcctcccacatcgaaccaagcacctcaatcgcaaccaaac
gcacaaaaccaaaataatcacctaggcggcccgccgggtgttcctccccctccatcccaa
caagtaccacagccgcaacagccacaaccgtcacaacaagtaccaccgcagcaggcaacg
caaggaccaccgcagcctccagcaacatcacacacgccaggtccggcacaacatttcgct
caggaccaagcacaacagcagggacagcaacagcaaaggcctgggacgacggtgaataat
gtgaatgtggtgccgcagaccccggcgcagcaggtgctcgtctctgcagcggatcggtgg
ggcctgttaggactgttggcgatgatcaagaatgcggatttggatagggggctgcttagc
gtaggtacagatttggggacaatggggttggatatgcaggctcaggggaacctatactcg
acgttcatcacgccttgggcagattcatcagcggcacatactgttgaaccggattttcat
cttccgacgtgctataacgtgcaacctccgccaccgggtccaagtaaagcagccgcattc
agcgacgagacgttgttctttatgttctattcgagtccgagggacgcactccaggaagta
gccgcacaagagctgtataaccgcaactggcgctaccacaaagaccttcgtctgtggctc
accaaagaatccggaacttctccctcgcagaaagtcgctggcggcgagcacggaacgtac
accttttgggatcccgatggctgggggaaagagcgcaaggatatgaccgtgctctattct
gacctcgaggagaagaacgcaccggtattcgcgcctggagcggcactgacgctgaacgga
cctgcgggcgcacagcagcagcagggacaggctggtgtcatcggagcacaggcaggtgcg
ggtgggatgcaacaaggaggacaggggcagatgcagggtcagcagggagggatgggtggg
cttggtggcgttgggggtatgatggcgatgggacagcggggcgcgttccagggagttggg
atggcggcgatgtaa

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