Stereum hirsutum: STEHIDRAFT_87567
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Entry
STEHIDRAFT_87567 CDS
T03127
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
shs
Stereum hirsutum
Pathway
shs04142
Lysosome
shs04144
Endocytosis
shs05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
STEHIDRAFT_87567
04142 Lysosome
STEHIDRAFT_87567
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
STEHIDRAFT_87567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shs04131
]
STEHIDRAFT_87567
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shs04147
]
STEHIDRAFT_87567
Membrane trafficking [BR:
shs04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
STEHIDRAFT_87567
Exosome [BR:
shs04147
]
Exosomal proteins
Proteins found in most exosomes
STEHIDRAFT_87567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_PEP5_VPS11
TPR_14
Motif
Other DBs
NCBI-GeneID:
18807512
NCBI-ProteinID:
XP_007310634
JGI:
Stehi1_87567
UniProt:
R7S081
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MDTSKPIAFAEHLQLSALGVQPTSISFQNLTLESDHFICVREKVNEQNQVVIIDLADANH
LMRRPITADSAIMHPKQKILALKAGRTLQIFNIETKQKVKSHVNNEDVVFWKWTSDSNLG
LVTDTAVYHWSIADTTTPPQKVFDRHPTLAGCQIINYRVSPDEKWMVVVGISGNSTNPSA
FKVKGSMQLYSKERGVSQPIEGHAAAFAEMKLDGRQHVTKLFAFSVRTGNGAKLHVVEID
HQAPDPPFTKKAVDVYFPPEATNDFPVAMQVSKRHGIVYLATKYGFIHLYDLESGACIYM
NRISGETIFVTCEHEASNGILCINRKGQVLSVSVDDTTMIPYILTTLNNTELAFKLASRA
NLPGADDLYIKQYQQLFQSGQFGEAAKIAANSPRGILRTAQVIETFKQAPTPPGGLSPIL
QYFGILLEKGQLNHLESVELARPVLQQGRKQLLEKWLKEDKLTCSEELGDIVRLHDMTLA
LSVYLRANVPNKVIACFAETGQTEKIVLYAKKVGFTPDYVSLLQHIMRTNPDKGAEFATQ
LANDESGPLIDVERVVDIFMSQNMIQPATSFLLDALKDNKPEQGHLQTRLLEMNLMHAPQ
VADAILGNEMFTHYDRPRIANLCEQAGLLQRALEHYEDIADIKRAIVHTNILPADWLVTY
FSRLTTEQSMACMQEMLRINIRQNLQVVVQIATKYSDILGPVKLIEMFESFKSFEGLYYY
LGSIVNLSEDPEVHFKYIQAATRTGQIREVERICRESNAYNPEKVKNFLKEAKLADQLPL
IIVCDRFDFVHDLVLYLYQNGLTKFIEVYVQRVNSFRTPQVVGGLLDVDCDETTIKGLLA
SVTGNFPIDELVNEVEQRNRLKLILPWLEARVQSGSQDPAVYNAMAKIFIDSNNNPEQFL
KENNLYEPLVVGKFCEARDPYLAYIAYAKGFCDEELIAITNENSMFKQQARYLVKRRQPE
LWAQVLSPGNDHRRQLIDQVVSTAIPESTDPDDVSITVKSFLSADLPIELIELLEKIIIE
PSAFSDNRNLQNLLLLTAIRADKGKVVGYINKLQNYDSGEIAKIATDHGLYEEALTIYKK
YEQHAEAINVLVEYIVSLDRGVDYANKVNRPEVWSRLAKAQLDGLRIKDAIDSYIKAEDP
SNFHEVIEIANHAGKHDDLVRFLQMARKSLREPKVDTELAYAYAKTDRLHDMEDFLGMTN
VADILEVGEKCFEDELYQAAKLLFTSISNWARLATTLIYLGENQAAVESARKAGNTQVWK
QVHAACLETSEFRLAQICGLNIVVHAEELPALIQTYERRGYFDEVLTLLEAGLSLERAHM
GIFTELAILYSKYKPEKLMEHLKLFVSRINIPKVIKATEKAHLWPELVLLYIKYDEFDNA
ALAMIERSSDAWEHNQFKDVVVRVANVEIYYKALSFYLQEQPTLLTDLLTVLIPRIDHAR
VVRMFQQIDHIPLIRSYLIAVQHLNIEAVNNAYNDLLIEEEDYKTLRDSIDSFDNFDNIA
LARRLERHELLEFRRLAAHLYKKNKRWEESISLSKQDKLYKDAMVTAATSSSTEVAEELL
SYFVDIGNKECFAALLFTCFDLLRSDVVEELSWQHGLNDFYMPYKIQSQRSLVEKLAALE
KEVKERAKKEIQKEQTEADAPIINPGLMGNRLLLTQGNGFPGQAPPPMMNGTGMGFAPQM
TGFGAY
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtcaaaacccatcgcattcgcagagcacctgcagctctctgcgctcggcgta
cagcccacgtctatatcgttccagaacttgacgctcgagagcgaccacttcatatgtgta
cgagagaaggttaacgagcagaaccaggtcgttattatcgacctggcagatgcaaaccac
ctcatgcgacgacccatcacggcggactctgcaatcatgcatccaaagcagaagatcctt
gcgctgaaggccgggcggacattgcagatcttcaacattgagacgaagcagaaagtgaag
tcccacgttaacaacgaagatgtcgtcttctggaaatggacgtccgactccaaccttggt
ctcgtcacagacaccgccgtgtaccactggtccatcgccgacacgactactcccccccag
aaggtcttcgaccgtcatcctaccctcgctggttgccagatcatcaactaccgcgtttca
ccggacgagaagtggatggtcgtcgtcggcatctcgggcaattcgacgaacccatccgcg
ttcaaggtcaagggctctatgcagctgtatagcaaggagagaggggtcagtcagcctatc
gaaggccatgcagctgcgtttgcggagatgaagctggacggacggcaacacgtcacgaag
ttgttcgcgttctcagtcaggacgggtaatggagctaagcttcacgttgtggagattgac
caccaggctcccgacccccctttcacgaagaaagcagtcgatgtctacttccctcccgag
gcgacaaacgacttccccgtcgccatgcaggtctctaagcgacacggcatcgtatacctc
gcaacgaagtacggtttcatccacctgtacgacctcgagtccggtgcctgcatctacatg
aaccgtatctccggcgagaccattttcgtcacctgtgagcacgaggcgagcaatggtata
ctctgcatcaaccggaagggacaggtcctcagcgtcagcgtcgatgacacgacaatgatt
ccgtatattttaacgacactcaacaacaccgagctggcgttcaagctcgcgagcagggcc
aatctgcccggtgcagatgatttgtacatcaagcagtaccagcaactgttccaaagcggt
cagtttggagaggcggcgaagattgctgccaattcgccacggggtatcctgcgtacggct
caggtcatcgaaacattcaagcaagcaccgaccccgcctggcggtctttcgccgattctg
cagtatttcggtatactgctcgagaaaggacaactcaaccatctcgagtccgtcgagctc
gcgcggccggttctgcagcagggcaggaaacagctgttggagaaatggttgaaagaagac
aagcttacatgtagcgaagaattgggagacatcgttcgccttcatgacatgacactggcg
cttagcgtctacctccgcgccaacgttcctaacaaggtcatcgcttgcttcgcggaaact
ggccagacggagaagatcgtactctacgccaagaaagttggcttcacacccgactatgtc
agccttctccagcatatcatgcgcaccaacccggacaagggtgcggaattcgctacgcag
ttggccaatgacgagtcggggcccttgatcgacgtcgaacgggtcgtcgatatcttcatg
tctcagaatatgatccagcccgccacttccttcctcctcgatgcactcaaggacaacaag
ccggagcaaggccatctgcagacccgacttcttgaaatgaacctcatgcacgctcctcag
gtcgctgacgctattctcggcaacgagatgttcacccactacgaccgcccacgtatcgcg
aacctttgcgagcaggcaggattgttgcagcgggctcttgaacactacgaggatattgct
gacatcaagcgcgcaattgtgcacacgaacattcttcccgcggactggctcgtcacgtac
ttcagccgcctcacgacggaacagtccatggcctgtatgcaggagatgttgcgtatcaac
atccgccagaacttgcaggtcgtcgttcagattgcgaccaagtactcggacatcttgggt
cccgtcaaactcatcgagatgttcgaatcgttcaagagcttcgaaggtctctactactac
ctcggttctatcgttaacctgagcgaggatcccgaggtgcacttcaaatacattcaggcc
gccacccgtactggtcagatccgcgaggtcgagcgcatttgtcgggaatcaaacgcttac
aacccggagaaggtcaagaacttcctcaaggaggccaagctcgcagaccagctccccctc
atcatcgtctgcgaccgtttcgacttcgtccacgatctcgttctgtacctttaccagaac
ggcctcaccaaattcatcgaggtctacgtccagcgcgtcaactctttccgcacgccacag
gtcgttggtgggttgttggacgttgactgtgacgagacgacgatcaagggactgcttgct
tccgtcacgggcaacttcccgatcgacgagttggtgaacgaggtcgagcagaggaacagg
ctgaagttgatcttgccgtggttggaggccagagtgcagagtgggagtcaagacccggcg
gtctacaatgctatggcgaagatcttcatcgacagcaacaacaacccagaacagttcctc
aaagagaacaacctgtacgagcctctagttgtcggcaagttctgcgaggcacgcgaccct
tacctggcttacatcgcgtatgccaagggcttctgtgacgaggagctcatcgcgattacg
aacgagaactcgatgttcaagcaacaggcgcgttacctcgtcaagcgtcgtcagcccgag
ctttgggcacaggttctctcgcccggcaatgaccaccgccgtcaacttattgaccaggtc
gtttcgaccgctatccctgagagcaccgacccagatgatgtctccattaccgtcaagtcc
ttcctgtccgccgacttgcccatcgaactcatcgagctcttggagaagatcatcatcgag
ccttcagcattcagcgacaaccgcaacctccagaacttgctcctcttgactgctatccgt
gccgacaagggcaaggttgtcggttacatcaacaagttgcagaattacgacagtggcgag
atcgcgaagattgccactgaccacggcttatacgaggaggcgttgactatctacaagaag
tacgagcagcatgcagaggctatcaatgtcttggtcgagtacatcgtctcactggatcgt
ggggtcgactacgcgaacaaggtgaatcgacccgaagtttggagtcgccttgccaaggca
cagctcgatggccttcgcatcaaggacgctatcgattcgtacatcaaggcggaagaccct
tcgaatttccatgaagtcatcgaaatcgccaaccacgctggcaaacatgacgatcttgtg
cgcttcctccagatggctcgcaagtctcttcgcgagcccaaggttgacaccgagctcgcc
tacgcctatgcgaagaccgaccgtctgcatgacatggaggacttcctgggtatgacaaat
gtcgccgacatcctcgaggttggagagaaatgtttcgaagacgagttgtaccaggccgcc
aagctcctcttcacaagtatctccaactgggccaggctcgcgacgacgctcatctacctc
ggcgagaaccaggcagctgtggagagtgcgaggaaagccggtaacacccaggtctggaag
caggtccatgctgcttgcttggagacttcagagttccgcctggctcagatttgcggtctc
aacatcgttgttcacgctgaggaactgccagccctgattcaaacgtatgagcgacgaggg
tatttcgatgaggtcttgacgttgttggaggctggtttgagtcttgaacgagcacacatg
ggtatctttaccgaacttgctattctatacagcaagtacaagccggagaaactcatggaa
cacctcaagcttttcgtctcacggatcaacattcccaaggtcatcaaggccactgagaag
gctcacctgtggcctgagctcgtgttgctctacattaagtacgatgaatttgacaatgcg
gcgctggctatgatcgagcgttcctcggacgcctgggagcacaaccagttcaaggatgtt
gtcgttcgcgtggcgaacgtggagatctactacaaggcactctcgttctacctccaggag
cagccgacactcttgacggatctattgacggtgctcatcccacgtatcgaccatgctcgc
gttgttcgcatgttccaacaaatcgatcatattcctctcattcgctcgtacctcatcgct
gtgcagcatttgaacatagaggcggtcaataacgcttacaatgacttgctgattgaagag
gaggactacaagacccttcgtgactcgatagacagctttgacaacttcgacaacattgcc
cttgcccggcggttagagagacatgagctcctcgagttcaggcggctggctgctcatctt
tacaagaaaaacaaacgctgggaggagtccatctcgctttcgaagcaggacaagctctac
aaggacgccatggtcacggcagcgacgtcgtcatctaccgaagtcgcggaggagctctta
tcctacttcgtggacattggaaacaaggagtgcttcgctgcactcctgttcacctgtttc
gacttgctgcggtccgatgttgtcgaggagttgtcgtggcagcatggtctcaacgatttc
tacatgccttacaagattcagtctcagcgcagtttggtcgaaaagttggccgctttggag
aaggaggtgaaggagcgggcgaagaaggagatccaaaaggagcagaccgaggcggacgct
ccaatcatcaacccaggactcatgggcaaccgtctccttttgacgcaagggaacgggttc
cctggccaggcaccgccacctatgatgaacggtactggcatgggctttgccccacaaatg
accgggtttggtgcgtattga
DBGET
integrated database retrieval system