Stereum hirsutum: STEHIDRAFT_89312 Help Entry STEHIDRAFT_89312  CDS       T03127                                  Name (RefSeq) antiviral helicase   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism shs  Stereum hirsutum Pathway shs03018   RNA degradation Brite KEGG Orthology (KO) [BR:shs00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     STEHIDRAFT_89312  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:shs03019]     STEHIDRAFT_89312 Enzymes [BR:shs01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      STEHIDRAFT_89312 Messenger RNA biogenesis [BR:shs03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      STEHIDRAFT_89312   mRNA degradation factors    3'-5' decay     Ski complex      STEHIDRAFT_89312 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel MTR4-like_stalk ResIII DEXQc_Suv3 Helicase_C ATPase_2 HTH_Tnp_ISL3 Motif Other DBs NCBI-GeneID:  18807628 NCBI-ProteinID:  XP_007298282 JGI:  Stehi1_89312 LinkDB All DBs Position Unknown AA seq 1240 aa AA seqDB search MDFVDTISKVAQPKSTDASGLLAELGLDTIPSREQVHQNLNDRLLVPRERLPANWLKDYQ VHWEHPLAIPSLLQSSPSIPPTTLSFVRTGLGGRVTGYAEVPAPTVQTGLTSTSIDRAPG PTKNFVRGKSGFVPFWPGGLENLAGVTEDVAEKSGQVKGLRTVAPGLSRGLRLPGDEEDP DVVNELDALAQHDFNDDVADGQIPEYANGHIDDFAPAAGPSSEIDDLLPTSRAQLNPVSS ARRPIKRVNVQKRDWAHVVDINKPMKNFHTLVPEMAHKYPFELDTFQKEAVYHLEMGDSV FVAAHTSAGKTVVAEYAIALAEKHMTRAIYTSPIKALSNQKFRDFKQTFSSSSVGILTGD VQINPEANCLIMTTEILRSMLYKGADLIRDVEFVIFDEVHYVNDAERGVVWEEVIIMLPD HVNIILLSATVPNAKEFADWVGRTKKKDIYVIYTAKRPVPLEHYLWAGREMHKIVDADRN FLGLGYKEAGEALRRKQDKEREAAGMPPVQRVGARGAAPQRGGGQRGGGRGAPTGRGGPA RGGPREGGGGGGGGFTRTFNAVDKSLYVHLLGHLRKKSLLPVVVFTLSKKRCEENAGTLS NVDLSTAVERSEVHVAIEKAVSRLKGSDRKLPQIGRMRDLLSRGIGVHHGGLLPIVKEVV EILFARGLVKVLFATETFAMGVNMPAKCVVFSGIRKHDGKSFRDILPGEYTQMAGRAGRR GLDPTGTVIIVTNDNLPEQTTLNTMILGTPGKLNSQFRLTYNMILNLLRVEALKVEEMIK RSFSENASQKLLPDQQKQVIENEKVLQKMPKLECDICLEDISTYYDVSADLVYINQELIS TASGHPQGIKSLSAGRVVILRDGHFRFSAAVLLKSIPGSNKVKTYCVLALVDQETKEGKH DLDLQSVPPRVLPTPQSLAVQDGVYDLRFIPLTSISMVTSRMIKVDVDGIVEKHSKTRMT DAILALDTIVKEWISSGAVPEVDWRIRSFDFQQMLREKDRLLRRVENPACLLCADFNHHY TILHAEKVLRANIANLKLAISDQNLELIPDYEQRIGVLQELQFIDQNSTVLLKGRVACEI NSANELILTELILENTLAAYEPEEVVALLSCFVFQEKTEVEAVFPPKLGEGRDKILAIAD RVGAVQDRHKVPADDFRSSLKFGLMEVVYEWAKGMPFEQITALTDVAEGTVVRVITRLDE TCREVRDAARVIGDADLMKKMEEAQIKIKRDIVFAASLYF NT seq 3723 nt NT seq  +upstreamnt  +downstreamnt atggattttgtggataccatatccaaagtcgctcagccaaaatcgaccgatgcctctggt ctattggcggagcttgggctcgacacgataccttcccgtgaacaggtccatcagaacctg aatgaccgtctgctcgttccacgagagagacttcctgcaaattggctcaaagactatcag gtccattgggagcatccgctggccataccttcgctattgcagagttcgccctcaataccg cccaccactctgtccttcgtcaggacggggctaggtgggcgtgttactggttacgcagag gttccggcgcccactgttcaaaccggattgacgtcaacatccattgaccgtgcgccaggc ccaacaaaaaacttcgtgcgagggaagtccggcttcgtacccttctggcctggtggtctc gagaaccttgccggtgtgaccgaggatgtggcagaaaagtctggccaagtcaaagggcta cggactgtggcgccaggattgagtcgtggacttcgacttcccggcgatgaggaagatcca gatgtggttaacgagcttgatgccctggcacaacatgactttaacgacgatgtcgcggat ggccagatccccgagtatgctaacggtcatattgatgactttgcaccagcagctggcccg tcatcggagatagacgatcttctacctacatctcgagcacaactcaacccggtctcttct gctcgtagaccgataaagcgcgtcaacgtgcaaaagcgagactgggcgcacgtcgtggat atcaataaaccgatgaagaacttccataccctggtccctgaaatggctcacaagtatccg ttcgagttggatacgttccagaaagaggcggtctatcatctcgagatgggagactccgtc ttcgttgccgctcacacttcagccggaaagaccgtcgtggcagagtatgctatcgcgctc gccgagaaacatatgaccagagccatctatacctcacccatcaaagcgctctcgaaccaa aaattccgagacttcaaacagacattctcgtccagctctgttggtatcctgacgggagac gtgcagatcaatccggaggcgaattgtcttattatgacaacagagattttgagaagcatg ctttacaagggtgcagatcttattcgggatgtggagtttgtgatattcgatgaggtgcac tatgtcaatgatgccgagcgcggtgtagtatgggaagaggtcatcatcatgctaccagac cacgtcaacatcatcctactctccgcaactgtgcccaacgcaaaagaattcgcagattgg gtcggccggacgaagaaaaaggacatatacgtcatctacaccgctaaacgtcccgtccct ctcgaacactacctctgggccggacgcgagatgcacaagatcgtcgacgcagaccgaaat ttcctgggcctagggtacaaagaagcgggcgaagcactccgtcgaaaacaggacaaggag cgtgaagcagccgggatgcctcccgtccaacgtgtaggcgcacgcggggctgcacctcaa agaggaggcggtcaacgtggcggtgggagaggagctcccactggccggggaggccctgct cgaggaggtccgcgagaaggtggcggtggaggtggaggtggtttcactaggacgttcaat gcggtagacaaaagtctgtatgtccacctgctgggacatctgcggaaaaagtcgttgctc cctgtggtcgtgttcacgctgtcgaagaaacggtgcgaggagaatgcagggacgctttcg aatgtggatttgtcgactgcggtagagaggagtgaggtgcatgtggcgattgagaaggcg gtttcgaggttgaaggggtcggatagaaagctaccacagatcgggaggatgagggatttg ctgtcgagagggattggtgtgcaccatggtggattactgccgatcgttaaagaggtcgta gagattctgttcgccagaggactcgtcaaagttctatttgcaaccgaaacgttcgccatg ggcgttaacatgccagccaaatgcgttgtcttctctggtatccgaaaacacgatggaaag agcttccgcgacattctccccggagaatacacccaaatggccggccgagcaggtcgtcga gggttagacccaaccgggacagtgatcatcgtaacgaatgataacctccccgagcaaacg acgttgaacaccatgatcctcggcacgcctgggaaactcaactcgcagttccggttgacg tataatatgatactgaacctgctgcgagtggaggctctcaaggtggaggagatgatcaag cggagtttttcggaaaatgcgtcgcagaagctgttgcctgaccagcagaagcaggtgatc gaaaacgagaaggtgctacagaagatgcctaagctcgagtgtgacatctgtttagaggat atcagcacctactacgacgtttcagccgatctggtctatataaaccaggagttgatttcc acagcctctgggcatcctcagggtatcaaatcattgtcggcaggacgggtcgtcatccta cgcgacggacacttccgcttcagcgcggctgttttgttgaagtcgataccggggagtaat aaggtaaagacgtattgtgttctagctttggtggatcaggaaacgaaggagggcaagcat gacctcgatctccaaagtgtacctcctcgggtgcttcccacacctcaatcgctcgcggtc caagatggcgtctacgacctgagatttatccctctcacgagtatatccatggtcaccagt cgaatgattaaggtcgacgtggacggcatcgtggagaaacattcgaagaccagaatgacg gacgccatactcgcactcgacactatagtcaaagaatggatctcatccggtgctgttccc gaagtggactggcgaatacgttcttttgatttccagcagatgctacgagaaaaagacagg ttgctcagacgagttgagaacccggcttgtctgttgtgtgcggactttaaccatcattac actattcttcatgcagagaaggtgctccgggcaaacattgctaacctgaagctggccata tcggaccagaatttggagttgataccggattacgagcaacggataggggtgctgcaggag cttcaattcattgaccagaactcaacggtgcttttgaagggaagggtggcatgtgagatc aactctgcgaacgagctcatcctcacggagctcatcctggaaaacacactggccgcatac gagccggaagaggtcgtcgcgctgctctcctgcttcgtgttccaggaaaagacagaagtc gaggcggtcttcccacccaaactgggcgaaggacgggacaagatcctcgcgatcgcggac cgggttggagcggtgcaggaccgacacaaggtcccagcggacgacttccgatcgagtctg aagtttggattgatggaagtcgtgtatgagtgggcaaagggcatgccatttgaacaaatc acggctctgacggatgtggcagagggaacggtggtgcgtgtgatcacgcgcttggacgag acgtgcagggaagtgcgggacgcggcgcgggtgattggagacgcagacttgatgaagaag atggaagaagcgcagatcaagatcaagagggacattgtattcgctgctagcttgtatttc taa

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