Stereum hirsutum: STEHIDRAFT_92364
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Entry
STEHIDRAFT_92364 CDS
T03127
Name
(RefSeq) DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
shs
Stereum hirsutum
Pathway
shs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STEHIDRAFT_92364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_92364
Enzymes [BR:
shs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
STEHIDRAFT_92364
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STEHIDRAFT_92364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
18807873
NCBI-ProteinID:
XP_007300954
JGI:
Stehi1_92364
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MSPAIPCGFRALPIPLVQLSLAAVLKCGQSFRWSIYPLHASAPSDPHFPTHEYRFCLRDR
VICLRQSRDTLFYRTVLPESSRSSSERSQYEAETLAWINDYFQLDVDLVKLYDEWSKRDA
VFARLRERFEGIRMLRQDPWENLISFICSSNNNIARITKMVNALCSNYSPPLLSMELPPL
ESDISQEPLTPASNSPEPEQEQHTFHPFPPPSRLAQPEVASELRKLGFGYRADFIQKTAK
MLVDAHGASVADEVTEQPEKWLMTLRDLPTAQARVELLKLMGVGRKVADCILLMSLDKRE
VVPVDTHVHQIAIKHYGMRGSSGAKQNMTPKLYDEVNNKLTTVWGEYAGWAHSVLFTADL
KSFSSYGLTSPASTPSKHSSSPALVVGATLSALPTPPITPLVESPSPSKKRRRKAAKDPA
EKPPTTIPVDDDVLPSFATLAERVKRRLRT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctgccataccctgcggctttcgtgctcttccaatacctttggtacaactatct
ttggcagctgtcttgaaatgcggccagtcattccgctggtccatatatcctctccatgcc
agtgctccgtcggatcctcacttccccacccacgaatatcgcttttgtctccgggatcgc
gtcatatgtctacgacagtcgcgggacacgcttttctaccgcactgtactccctgaatcc
tcgcgctcgtcatctgaaaggtcacagtatgaagcggagacacttgcttggatcaacgac
tactttcagctggacgtcgatcttgtcaagctatatgacgagtggagtaagagggatgca
gtttttgctagactcagagagaggttcgaaggcattcgtatgctaaggcaggacccttgg
gagaatctaatttctttcatatgctcctcgaacaacaacatagcacgtatcaccaagatg
gtcaatgctttgtgcagcaattactcgccacccctcctctccatggaattgccgccattg
gaatccgatatctcgcaagagcctctgactccggcctcaaattctccagaacccgaacaa
gagcaacatacgttccacccgttccccccaccttcacgactcgcacaaccagaagtcgcg
tccgaactacgaaaacttggatttggatatcgtgccgactttattcaaaagacggctaaa
atgttggttgatgcacatggagcgtcagtggcagacgaagtcaccgagcagccagagaaa
tggctcatgaccttgcgggacctgcctacagcacaggcaagagtggagttgttgaagctg
atgggtgtaggccgtaaagtggccgattgtattctgctaatgagcctagacaagcgagaa
gtcgtaccagtcgacacccacgtccaccagatagcaatcaagcattacggcatgcgcggt
agttccggtgcaaaacaaaacatgacaccaaagttgtacgacgaggtcaacaacaagctt
actacggtctggggagaatatgccggctgggctcattccgtcctcttcactgcggacttg
aagtcattctcttcgtatggcctcacgagtcctgcctccacgcccagcaagcactcctct
tcaccagcgttggtcgtcggtgccacactgtccgctttgcctacgccacccataacgccg
ctggtagaatctccctcaccatccaagaaacgcagacggaaggcagcgaaggatccagcg
gagaagccaccaacgactatccctgttgatgacgacgttcttccatcgtttgcgaccttg
gctgaaagggtgaagaggaggctcagaacgtag
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