Stereum hirsutum: STEHIDRAFT_94454
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Entry
STEHIDRAFT_94454 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
shs
Stereum hirsutum
Pathway
shs03013
Nucleocytoplasmic transport
shs03015
mRNA surveillance pathway
shs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
STEHIDRAFT_94454
09122 Translation
03013 Nucleocytoplasmic transport
STEHIDRAFT_94454
03015 mRNA surveillance pathway
STEHIDRAFT_94454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_94454
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_94454
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
STEHIDRAFT_94454
TREX complex
STEHIDRAFT_94454
Spliceosome [BR:
shs03041
]
Complex C
Other components
EJC/TREX
STEHIDRAFT_94454
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
STEHIDRAFT_94454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
18808028
NCBI-ProteinID:
XP_007302154
JGI:
Stehi1_94454
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MYNQFRGGPARLNSYHGPKRQLLGNPAGHVPPAWRNANVPAGLPHNANIASGSGPKKAVE
AGSKILLSNLPMDVGENEVEELFKRTVGPMKDLFIIYNSQGRSKGMAVVTFQRPGDAVVA
RTKYNQKIVDGKHRIKIEIVTDTDDPKLQAAPTPAPPPPTLLQRIGHVPASAQNGTKVVP
LRVGPPVAPTPTQPKVRVAPRPIPRPAAAVAQIPAGPRRRRQKKGAKRVMKKPATAADLD
QEMEDYRAKAAA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtataatcagtttcgtggagggccagctcggctcaactcatatcatggcccaaaacga
cagctcctcggaaaccctgcggggcacgtcccacctgcctggcgaaatgcgaacgtcccc
gctggactacctcataacgccaacatcgcatcgggctcgggacctaagaaggctgtagaa
gctggtagcaaaatattgttgagtaatttgccaatggacgttggggaaaacgaagttgag
gaactcttcaaacggacggttggtccaatgaaggatctcttcatcatatataatagccaa
ggccgttcgaaaggcatggcggtcgtaaccttccaacgaccgggcgacgcggttgtggca
cggacgaagtacaaccagaaaatcgtggacggtaaacaccgcatcaagattgagatagtg
actgacacggatgaccccaagcttcaagctgcaccgacacccgctcctccgccacccact
ctacttcagcgcataggacatgtaccggcgtcagctcagaatggtactaaggttgttcct
cttagagttggtcctccggtagcgccaacaccgacccaaccgaaggtccgtgtggcgcct
cgtccaataccccgtcctgctgccgccgtcgcccaaattcccgcaggtccacgaaggcga
cgccaaaagaaaggtgccaaacgtgtgatgaagaagcctgcgacagcggctgacctggac
caagaaatggaagattaccgtgccaaagctgccgcatga
DBGET
integrated database retrieval system