KEGG   Stereum hirsutum: STEHIDRAFT_94454
Entry
STEHIDRAFT_94454  CDS       T03127                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
shs  Stereum hirsutum
Pathway
shs03013  Nucleocytoplasmic transport
shs03015  mRNA surveillance pathway
shs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    STEHIDRAFT_94454
  09122 Translation
   03013 Nucleocytoplasmic transport
    STEHIDRAFT_94454
   03015 mRNA surveillance pathway
    STEHIDRAFT_94454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shs03019]
    STEHIDRAFT_94454
   03041 Spliceosome [BR:shs03041]
    STEHIDRAFT_94454
Messenger RNA biogenesis [BR:shs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     STEHIDRAFT_94454
    TREX complex
     STEHIDRAFT_94454
Spliceosome [BR:shs03041]
 Complex C
  Other components
   EJC/TREX
    STEHIDRAFT_94454
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    STEHIDRAFT_94454
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 18808028
NCBI-ProteinID: XP_007302154
JGI: Stehi1_94454
LinkDB
Position
Unknown
AA seq 252 aa
MYNQFRGGPARLNSYHGPKRQLLGNPAGHVPPAWRNANVPAGLPHNANIASGSGPKKAVE
AGSKILLSNLPMDVGENEVEELFKRTVGPMKDLFIIYNSQGRSKGMAVVTFQRPGDAVVA
RTKYNQKIVDGKHRIKIEIVTDTDDPKLQAAPTPAPPPPTLLQRIGHVPASAQNGTKVVP
LRVGPPVAPTPTQPKVRVAPRPIPRPAAAVAQIPAGPRRRRQKKGAKRVMKKPATAADLD
QEMEDYRAKAAA
NT seq 759 nt   +upstreamnt  +downstreamnt
atgtataatcagtttcgtggagggccagctcggctcaactcatatcatggcccaaaacga
cagctcctcggaaaccctgcggggcacgtcccacctgcctggcgaaatgcgaacgtcccc
gctggactacctcataacgccaacatcgcatcgggctcgggacctaagaaggctgtagaa
gctggtagcaaaatattgttgagtaatttgccaatggacgttggggaaaacgaagttgag
gaactcttcaaacggacggttggtccaatgaaggatctcttcatcatatataatagccaa
ggccgttcgaaaggcatggcggtcgtaaccttccaacgaccgggcgacgcggttgtggca
cggacgaagtacaaccagaaaatcgtggacggtaaacaccgcatcaagattgagatagtg
actgacacggatgaccccaagcttcaagctgcaccgacacccgctcctccgccacccact
ctacttcagcgcataggacatgtaccggcgtcagctcagaatggtactaaggttgttcct
cttagagttggtcctccggtagcgccaacaccgacccaaccgaaggtccgtgtggcgcct
cgtccaataccccgtcctgctgccgccgtcgcccaaattcccgcaggtccacgaaggcga
cgccaaaagaaaggtgccaaacgtgtgatgaagaagcctgcgacagcggctgacctggac
caagaaatggaagattaccgtgccaaagctgccgcatga

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