Stereum hirsutum: STEHIDRAFT_97347
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Entry
STEHIDRAFT_97347 CDS
T03127
Name
(RefSeq) DWNN-domain-containing protein
KO
K15541
protein MPE1
Organism
shs
Stereum hirsutum
Pathway
shs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
STEHIDRAFT_97347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_97347
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
STEHIDRAFT_97347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-CCHC
zf-CCHC_3
zf-RING_2
zf-CCHC_5
zf-C3HC4_3
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
18808243
NCBI-ProteinID:
XP_007304304
JGI:
Stehi1_97347
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MASSVFYKFRSQREESRVTFDGTGISVFDLKKEIILANNLGKSNDFDISVFDKSSNEEFK
NDQHIIPRSSSVIVKRLPAVRPGKGNAAMYIAGTASAGADSASKSGTSGNSSNNWHKGSM
SRRFDGKEDAPKPTPPPRASPSKLSTSIAQDDEEAAMAAMFQMQSANWEETQEKMSHATR
IYTNNRGTGFSRGGKTTPHSHHHHNDKPLPPSYVCYRCGQKGHWIQDCPTNSDREFDNKP
RIKRTTGIPRSFLKAIESPATSQIGHGVMVTPEGGYVVAQPDVASWQKQVSRPKGLTESD
VRDRPSKDPAIVCPIDNKIFRDAVKTPCCETTYCEECIQTHLLEKDFICPHCATKIASLD
KLSQDKPKRAKVAEYIEKEIELSKKVEEEGANGTPGPNGTPVPDGPSNSQQNGLPNQDHP
EYYQDPNLIADMAMSQMIQDGIPQLQAQIQQLSVMLNNNTLPQAVRQQTEMQYQQLQVQL
QQAQEIGAALAMQRSFAAQAAQQQQQQQQQQQQHQQQQGIAGFGNQQQAGHESAYQRLPL
NNRRRNMKRERPSDFLEVGPDMEREPKVAKH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctctgtcttttacaagttcaggtctcagagagaggagtctcgggtgacattt
gatggcactggcatatctgtatttgacttgaagaaagagatcatcctagctaacaatctc
ggcaagtctaatgacttcgacatttctgtgttcgacaagtcgtccaacgaagagtttaaa
aatgaccagcatatcattccacgatcttcttctgtcattgtgaagcgcttgccagcagtg
cgtccgggcaagggtaacgctgctatgtacattgctggcacagcgtctgccggtgctgat
tcagcttcaaagtctggtacttccggtaactccagcaataattggcacaagggctcgatg
tcacggcgcttcgatgggaaggaagatgctccgaagcccacgccgccaccaagagccagc
ccttcaaagctatctacgtcaatagcgcaggatgatgaggaggctgcaatggccgccatg
ttccaaatgcagtcggctaactgggaggagacccaggagaaaatgtcacatgctacgcgt
atatacactaacaaccgcggaaccggcttctctcgcggaggtaaaacgacaccacacagt
catcaccaccacaacgacaaacctttaccccccagctatgtctgctatcgatgtggacag
aaaggtcattggatccaggattgtccgacgaacagcgaccgagagtttgacaataagcct
cgcatcaaacgaacgaccggtatccctcgtagttttctcaaagccatcgaaagccctgct
acgtctcaaatcggacatggagtcatggttacgcccgaaggtggctacgtcgtcgctcag
cctgatgtggcttcgtggcaaaagcaagtctccaggccgaagggtctcacggagtcagac
gtgcgggatcgaccttcgaaagaccctgcgatcgtatgtccgatagataataaaatcttc
cgtgacgctgtgaagactccatgctgcgagacgacatactgcgaggaatgtatacagacc
catcttttggagaaggacttcatatgtccgcactgcgctacgaagattgcttcgcttgac
aagctttcgcaggataagccaaagcgtgcgaaggtcgcagagtatattgagaaggagatc
gaactgagcaagaaggtagaggaagagggcgcgaatggcactcctggaccgaatggcaca
cccgtccctgacggtccctcaaattcccaacaaaacggcctccccaaccaagatcacccc
gaatactaccaagacccaaacctcatcgccgacatggccatgtcacaaatgatccaagac
ggaatcccacagcttcaagcacaaatccaacaactctccgtaatgctgaacaacaacaca
ctcccgcaggccgtccggcaacagacggaaatgcaataccagcagcttcaggtgcagttg
cagcaggcgcaggagatcggggctgcgttggctatgcagcggagttttgcggctcaggcg
gcgcagcagcaacagcagcagcagcaacaacaacaacaacatcagcagcagcagggcatt
gcaggattcggcaaccagcagcaggcaggacacgagtctgcgtatcagaggttgccgttg
aataataggaggagaaatatgaagagggagaggccttcggatttcttggaggttgggccg
gatatggagagggagccgaaggtggcgaaacattag
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integrated database retrieval system