Stereum hirsutum: STEHIDRAFT_98859
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Entry
STEHIDRAFT_98859 CDS
T03127
Name
(RefSeq) DNA replication factor C large subunit
KO
K10754
replication factor C subunit 1
Organism
shs
Stereum hirsutum
Pathway
shs03030
DNA replication
shs03410
Base excision repair
shs03420
Nucleotide excision repair
shs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STEHIDRAFT_98859
03410 Base excision repair
STEHIDRAFT_98859
03420 Nucleotide excision repair
STEHIDRAFT_98859
03430 Mismatch repair
STEHIDRAFT_98859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shs03032
]
STEHIDRAFT_98859
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_98859
DNA replication proteins [BR:
shs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
STEHIDRAFT_98859
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
STEHIDRAFT_98859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
AAA_5
AAA_30
RuvB_N
nSTAND3
AAA_22
BRCT_2
AAA_assoc_2
AAA_33
AAA_16
AAA_18
AAA_19
Motif
Other DBs
NCBI-GeneID:
18808346
NCBI-ProteinID:
XP_007305420
JGI:
Stehi1_98859
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MEVEDDEPVPAPKKKTPAKPRASTGSTKKTEASSSKTKPAKEKADAKEKEKEAKTEEPAK
PKPNWAAIRAARLAGPVAPGSKAVPEPASPDCLAGLSFVFTGELSAFSRDEAVDLAKRFG
GRVVAQPSSKTNFVVLGSNAGQSKLNAIAKHQLKTLSEDEFLELIATREGPSAGGEEDEK
AKKKREKEMKAIRESAKEMERREKVVEKGKGTGSGSGGAKVVDAKTQLWTDRYAPQTLKE
ICGNKAQVERLQNWLSSWPNSLKANFKKPGKDGMNIFRGVMLSGPPGIGKTTSAHLVAKL
AGFTPIELNASDTRSKKLVENSTNITNTSLDGWMGGGEMMNAAGIPITDKSCLIMDEVDG
MSAGDRGGVGALAALIKKTKIPIICIANDRSAQKMKPLTNVTFDLKFRKPDAAAIRSRML
TIAFKEKMKIPANVIDQLVTGVNSDIRQVLNMLSTWKLSSSTMDFDEGKSLAKMNEKYAV
MTPFNIIQKMLGPYMFGPTSRETLGDKMELYFQDYSFVPLFVQENYLKTTPVRARNEEGP
MKELKVLDLMEKASESISDGDLVDALIHGPEQHWTLMPTHSVLSTVRPASFLYGPGQGYA
GPNAMSFPQWLGQNSKQNKLSRQLGDIQIHMRLKVCGDKNEIRQSYVPALFPHIVQPLMD
RGASAVEGVIDYMDEYYLSREDFDTLVEVGVGERREAVVGKEISAATKTALTKKYNAREH
PIPFHKAQDLGKIPKKLQGGPAPDLEEAFDVEDVDEPEEPKGSQEDDSIENDKMIKQAGA
KAKKATTADTKGKGKASGGAKGKK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaagacgacgagcccgtgcccgcgccgaagaagaagacgcccgcgaagccg
agggcgagtacgggttctacgaagaagaccgaggcgtcatcgtcaaaaactaagccagcg
aaggagaaagcagatgcaaaagagaaggagaaggaggcgaagacagaggagcccgcgaaa
ccgaaacccaactgggccgccatcagagccgcccgcctcgcagggcccgttgccccaggc
tccaaggccgtccccgaaccggcttcaccggattgtctggctgggttatcgttcgtgttc
acgggtgaactgtcggcgttctcgagggacgaggctgttgatctggcgaagcggtttgga
ggtcgtgtcgtcgcccaaccctcctccaaaaccaacttcgtcgttctcggctccaacgcg
ggccagtccaaactcaatgccatcgccaaacatcagctcaagactctttcggaggacgag
ttcctcgagctgatagcgacgagggaaggcccgagcgcgggcggtgaggaggacgagaag
gcgaagaagaagagggagaaggagatgaaggcaattagggagagtgcgaaggagatggag
aggagagagaaggtcgttgagaaagggaagggtacggggtcggggtctggaggtgcgaaa
gtcgtggacgcgaagacacagctttggacggatcggtacgcgccgcagacgctgaaagag
atatgcggcaataaggcccaggtagagcggttgcagaattggttgagttcctggccaaac
tccttgaaagcaaacttcaaaaaaccgggcaaagacgggatgaatatcttccgcggcgtc
atgctctccggtcctcccgggataggcaagactacgagcgcccatctcgttgcgaaactc
gcggggttcacgccgatcgagctgaatgcgagtgatacaaggagtaagaagctcgttgag
aacagcacaaacatcacgaatacttctttggatggatggatgggcggtggcgagatgatg
aacgcggctgggataccgatcacagacaagtcctgtctcatcatggacgaggtagacggg
atgtctgctggagatcggggtggtgttggggccttagcggcgttgatcaagaagaccaag
attccgattatatgtatcgcaaacgacaggtcagcgcagaagatgaagccgttgacgaac
gttactttcgatcttaagttccgcaaaccggacgctgcagctatccgctctaggatgctc
accatcgccttcaaagagaagatgaagatcccagcgaacgtgatcgaccagctcgtcacc
ggcgtcaactccgatattcgtcaagtgttgaatatgctttcaacgtggaagctttcaagc
agtacgatggactttgacgagggcaagtcgctggcgaaaatgaatgagaaatacgcggtg
atgacaccgttcaacattatccagaagatgctcgggccttacatgtttgggccgacttcg
agggagacgctgggcgataaaatggagctttatttccaggattattcgtttgtgcctctg
ttcgtccaggagaattatctgaagacgaccccggtgcgggcgaggaacgaagaggggccg
atgaaagaattgaaggtgttggacctgatggagaaggcttcggagtcgatatcagatggg
gatttggtggatgcgctgatccatgggcccgaacaacactggacgctcatgcccacccat
tccgtcctctctactgttcgacccgcttcgttcctttatggacctggacagggatatgca
gggcctaatgccatgtcgttccctcaatggcttggccagaactcgaagcagaacaagctc
agtcgacaactgggcgatattcagatccacatgcggctcaaggtctgcggcgacaagaac
gaaattcgacagagttacgtcccggcactgttcccgcatattgtgcagccgcttatggat
cgtggtgcgagcgcggtagaaggcgtgattgattacatggatgagtattacctatccaga
gaagatttcgacacgctcgtggaagttggcgttggagaaagacgcgaggctgtcgtcggg
aaagagatctcggcggccacgaagacggcgttgacgaagaagtataatgccagagagcac
cctataccgttccataaagcccaagatctgggcaagataccgaagaaactacaaggcggc
ccggcaccagatctcgaagaggccttcgacgttgaggatgtggacgaacccgaggagcca
aaaggatcgcaggaagacgatagtatcgagaacgacaagatgatcaagcaggctggcgcg
aaagcaaagaaagcaaccacggcggacacgaagggcaaggggaaggcatcgggaggggcg
aaggggaaaaagtga
DBGET
integrated database retrieval system
