Stereum hirsutum: STEHIDRAFT_99068
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Entry
STEHIDRAFT_99068 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
shs
Stereum hirsutum
Pathway
shs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STEHIDRAFT_99068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_99068
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
STEHIDRAFT_99068
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
STEHIDRAFT_99068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
18808358
NCBI-ProteinID:
XP_007305541
JGI:
Stehi1_99068
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MAARKLQTEIDRTLKKVSEGVELFESIYDKMQACTNQTQKEKLETDLKTQIKKLQRLRDQ
IKTWVASNDIKDKTQLLENRRLIETQMEKFKACEKEMKTKAFSKGGLLQSAKLDPKAQEK
MQTTAWLQDCVENLLLQVEASEAEIETLQAGGRKKNKAGSERAEELDQLNTRRKWHISRL
EIMLRLLDNGTINSEQALELKEDINYYVEDNAADDYNEDEGMYDELNLDEEEEKFGLVAD
ERDSDESEDESEDLPPRTPSKKHDEESVSSSKRDDSPILKKAGVTLQLRKHSTATEAPKP
PPNPNFAQQPMASILKAGLPSSSSQPSTTRAPPPQLPPIRYAAAAAAAVTPSTSAQSVTT
NTTSTTTHSSPQNIASPHETSEDKATSSLSSPQANRTLSQDTYNAVLSSPSLTHPSTNSP
LLSSTSAQMPDGSTSFDSPVMSEAAESIVIGSGSVSASAAGEATSSPQVTQSPHASQILA
DGHAQAPQPHTNGTSTTTSTTPATAAQAAVAPSPMPQQVQPSSYPIGGPPGVPPPSAVNA
TATSNTSSPLPSAQQPTQAQPQQGTVPQFPPGVKVAAGSEAQAQTQQSRPQPQQPMAQPP
QQLPPGVLAAAAGHRPPSAVPTPGMTPDRIPPRSSSTAFPAGLSDLVASFESVKQKAPHR
MTNLDQVHKLLEGGYSGLPQPQDTAKPKYYVPRNPYQTPSYYPQSPNPVLSSAGLFSQLD
VETLFYVFYFLPGTYQQYLAAKELKRQSWRFHVKYLTWFQRHSEPQAITEEYEQGVYVYF
DWEGSWCQRKKSDFRFEYRYLSED
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacgaaagctacaaacggaaatcgaccgaacattaaagaaggtctcggagggc
gtcgagctcttcgagagcatctacgacaagatgcaggcctgcacgaaccagacgcagaag
gagaaactggagacggacctcaagacgcagattaagaagttgcagcggttacgggaccag
atcaagacctgggtggcctcgaatgatatcaaggacaagacgcagctgctcgagaaccga
cggctcatcgagacacaaatggaaaagttcaaggcctgcgagaaggagatgaagacgaag
gcgttctcgaaaggtgggctgctccagtcagccaagctcgacccgaaagcgcaggagaaa
atgcagacgactgcatggctccaggattgcgtcgagaacttgctcctccaggtcgaggca
tcagaagcagagattgagacgctgcaggctggggggagaaagaagaacaaggctggctcg
gaacgcgcggaggagctggatcagctgaatacgaggagaaagtggcatattagtcggctg
gagatcatgctgcggttactcgacaatgggacaatcaattcggagcaagcacttgagctc
aaggaggatatcaactactatgtcgaggacaacgcggcggacgactataacgaggatgag
ggcatgtatgatgaactcaacctcgacgaggaggaagagaagttcggtctcgtggcagac
gaacgagattcagacgagtcggaagatgagagcgaagacctaccacctcggacaccgtca
aagaaacacgacgaagaaagcgtatcgagtagtaaacgagacgacagtcctatacttaag
aaggcaggcgtcacattacaactacggaaacactcgacggcaacagaagcaccgaaacca
ccaccaaatccgaacttcgctcaacaaccaatggcaagcatcctcaaggccggtcttcct
tcatcgtcgtcacagccatcaacaacacgagcacccccaccgcaacttccaccaatacga
tatgccgcagcagcagcagcagccgtcacgccctcaacaagtgcccaatccgtcaccacc
aacacaacatcgacgacgacacattcttcaccacagaatatcgcatcgccacacgaaaca
tcggaagacaaggcaacatcgtcattatcgtcaccacaggcaaataggacgctcagccag
gacacgtataatgcagtgctcagttcaccgagcttgacacatccgtcgacgaatagcccg
ctgctttcatcgacttctgcacagatgccggatgggtcgacatcgttcgattcgccagtg
atgtctgaggcagcagagagtattgtgattgggtctgggtcggtttctgcgtcagctgca
ggagaagctacatcttcgccacaagtaacacagtcaccacatgcatcgcaaatacttgca
gacggacacgcacaagcaccgcaaccacacacgaacgggacgtcaaccaccacgagcaca
acaccagccacagcagcacaggctgccgtcgcaccttcacccatgccacaacaggtccaa
ccctcgtcgtatcctatcggtggcccacccggtgttcctccccccagcgccgtcaacgca
accgccacttcaaatacttcgtcgcctttgccttcggctcaacagccaacacaagcgcag
ccacagcaaggaacagtgccacagttccctcctggtgtcaaggtggccgccggttcggag
gcacaagcacagacacaacaatctcgaccacaaccacaacaaccgatggctcaaccaccc
cagcagctccctccgggtgttttggcagcggcagcaggacacaggccacccagcgcggtt
cctacaccggggatgacgccggataggatcccgccgaggagtagctcgacggcgttccca
gctgggttgtcagatcttgtggcatcgtttgagagcgtgaagcagaaggctccccatcgg
atgacgaacttggaccaggtacacaagttgctcgagggcggatactcagggttgccgcaa
ccacaagatactgcaaagcccaagtactatgtgccacggaatccttaccagacgccgtca
tattaccctcagtcgcccaaccctgtgctcagctcggcaggcctgttctctcagttagac
gtcgagacactgttttatgtcttctacttccttcctgggacatatcagcagtacctcgcc
gccaaggagctcaagcgccagtcgtggcgattccacgtgaaatacctcacctggttccaa
cgccactctgagccgcaggcaatcacggaagaatacgagcagggcgtgtatgtgtatttc
gattgggagggctcgtggtgtcagaggaagaagagcgatttcaggttcgagtatcgttac
ctgtcagaggattga
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integrated database retrieval system