Staphylococcus hsinchuensis: QQM35_06280
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Entry
QQM35_06280 CDS
T10123
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
shsi Staphylococcus hsinchuensis
Brite
KEGG Orthology (KO) [BR:
shsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shsi03400
]
QQM35_06280 (addA)
Enzymes [BR:
shsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QQM35_06280 (addA)
DNA repair and recombination proteins [BR:
shsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QQM35_06280 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
XAF69679
UniProt:
A0ABZ3EA08
LinkDB
All DBs
Position
1243211..1246864
Genome browser
AA seq
1217 aa
AA seq
DB search
MMSQIPIKPTNTRWTDGQWRSIYAKGQDVLVAAAAGSGKTAVLVERIIQRIIKDEIDVDR
LLVVTFTNASAREMKHRVDQRIQEASLEAPENTHLKNQRIKIHQAQISTLHSFCLKLIQQ
HYDVLDIDPNFKTSSEAENILLLEQTIDEVLEQHYDKLDPHFIDLTEHLSSDRNDELLRD
TVKELYYFSVANPNPLNWLAHLSDPYEDEQQQQELLTLLNDIASIFMTSALEALNKSYDL
FMMLESVEKQVEVIETERQFMAQAMEDGYLNSQLIADHQFIVRFPAKNKKVKEANEMMMD
VYDDAKKYYDQYKDLVTKVQTDYYSRDAESLTNDMQQLAPRIQYLTQITSDVINQFNQKK
RRRNILDFSDYEHFALRILMDDDGEPTEIADLYRKQFEELLVDEYQDTNRVQEQILTCIK
RGTESDGNLFMVGDVKQSIYKFRQADPSLFIEKYNRFTTDGSEYGMRIDLSQNFRSRKEV
LTTTNYLFKHMMDEAVGEIKYDAAAQLYYGAPFDTENHDVHLNMLIQDDQSDLKGSEQEA
EYIVQQVEKIINDYKVYDIKTEQYRPAEYKDIVILERSYGQARNIQQAFKDHNIPFHVNS
KEGYFEQTEVQLILSFLKTIDNPLQDIYLVGLMRSVIYQFTEDELSNIRIISPNDDYFYQ
SIQHYIQHDDVDQNLVEKLKAFLTDIELYQEYSQTHAVYQLIDKFYNDHFVIQYFSGITG
GKGRRANLYGLFNKAVEFEDSSFRGLYQFIRFIDELIDRGKDFGEENVVGPNDNVVRMMT
IHSSKGLEFPFVIYSGLSRKFRRADLYKPVTLNQQYGLGMEYYDVEHQLTFPSLSSVTYK
AINEKEMISEEMRLIYVALTRAKEQLFLIGRVKSEKELQNWEQVSVSGTHLPVSYRLTAQ
SPISMIYPILSKYQSTELSNELRFERNIDEVDTSMKPYVQLNIDLYEDIATESVGEIERA
HTLNEMESFNSGNEEVRMQIERQLAFRYPYQTAIHQPSKQSVSELKRQLETAQTDTNYDR
VRQYRIGTRTYERPAFLSHTKVRRANEIGTLMHTVMQHLPFTEDGLTREQLLNYIDRLID
KNIIKEDAKKDIQIDDIMHFIESPLYRKIANSDAIYRELPFVVNQNKVDKRPDDQDASII
QGMIDLIFVSDGEYYFVDYKTDAFNRRRSMTDEEIGQQLKDRYKIQMAYYRNTLETILNK
EVKGYLYFFKFGQLSID
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtcaaattccaataaagccgacaaatacacgttggacggatggtcaatggcgc
agtatttatgctaaaggccaagatgtactcgtagctgcagcagctgggtcaggaaagact
gcagtacttgttgaacgtattatccaacgtatcattaaagatgagatcgacgtcgatcgc
ttattagtcgtgacgtttacaaatgcgagtgcacgtgagatgaaacatcgtgttgatcaa
cgcattcaagaagcatcattggaagcaccagagaatacacatttaaaaaatcaacgtatc
aaaattcatcaagcacaaatttcaacattacatagtttttgtttgaaattaattcaacaa
cattatgatgtattagatatagatccaaactttaaaacgagtagtgaagcggaaaatatt
ttattactcgagcaaacaattgatgaagtattagagcaacattatgacaaactagacccg
cattttattgatttaacggaacatttatcttctgaccgtaatgatgaactattgcgcgac
actgtaaaagagctgtattactttagtgtggctaaccctaacccgttaaactggttagct
cacttatcagatccatatgaagatgaacagcagcaacaagaattactaacattattaaat
gacattgcgtctatatttatgacctctgcattggaagcactgaataagagttatgattta
tttatgatgttagaatcagttgaaaaacaagtagaagtcatagagacagaacgccagttt
atggcacaggctatggaagatggatatttaaattcacaacttattgcagatcatcaattt
atcgtacgtttccctgccaaaaataaaaaggtcaaagaagcgaatgaaatgatgatggat
gtctatgatgatgctaaaaaatattacgaccaatacaaagatttagtcacaaaagtacaa
acagattactattccagagatgcggaaagtttaactaatgatatgcaacagttggcacca
cgcatacaatatttaacacagatcacatcagatgtaataaatcaatttaatcagaaaaaa
cgtcgccgtaacatattagatttctcagattatgaacacttcgcgttacgtatcttaatg
gatgatgacggagaacctacggaaatagcagacctttatagaaagcagtttgaagaatta
ctcgtcgatgaatatcaagatacgaaccgcgtgcaagaacaaattctaacgtgtattaaa
cgtggaaccgaatctgatgggaatttatttatggtcggagacgtaaaacaatcgatttat
aagtttaggcaagccgatccaagcctctttattgaaaaatataacagatttacaactgat
ggctctgaatacggtatgcgcatcgatttatctcaaaatttccgttccaggaaagaggta
ttaactacaaccaactatttatttaaacacatgatggatgaagcggttggcgaaataaaa
tatgatgctgcagcacaactctattacggagcaccatttgatacggaaaatcatgatgta
catttgaatatgcttatccaagatgatcaatcagatttaaaaggttctgaacaagaagcg
gagtacattgtgcaacaagtggaaaaaattataaatgactataaagtttatgacattaaa
actgagcaatatcgtccagctgaatacaaagatatcgttatacttgaacgttcttacggc
caagcacgtaatattcaacaagcgtttaaagatcacaatataccatttcatgttaacagc
aaagaagggtacttcgaacaaactgaagtacagttaatcttgtcatttttaaaaactata
gacaatccgttacaagatatatatttagtcgggttgatgcgttcagtcatttatcagttt
actgaagacgaactttcaaatattcgaattatcagtccgaatgatgattatttttaccag
tcgattcaacattatattcaacatgatgatgttgatcaaaatctcgttgaaaagttaaaa
gcatttttaacagatatcgagctttatcaagaatatagtcaaacacatgccgtttatcaa
ttaattgataaattttataatgaccatttcgtcattcaatattttagtggtattactggt
gggaaaggccgtcgcgctaacttatatggattgtttaataaagcagtggaatttgaagat
tctagtttccgagggttatatcaatttataagatttatagacgaattgatagatagagga
aaagattttggtgaagaaaatgtcgttggaccaaatgacaatgtcgtacgtatgatgacg
attcatagtagtaaaggtttagagtttccttttgtcatttattcaggtttatcaagaaag
tttcgtcgtgcagatctttataaaccggttactttgaaccaacaatatggtctaggaatg
gaatattatgatgtggaacatcaattaactttcccatcattatcttcagttacgtataaa
gctatcaatgaaaaggaaatgatctctgaagaaatgagattaatttacgtggcattaaca
cgtgcgaaagagcaactctttttaatcggacgtgtaaagtcagagaaagagttacaaaat
tgggaacaagtttctgtttcaggtacgcatcttccagtgagttaccgtttaactgcacaa
agtccaatttcaatgatttatccgatactttcaaagtatcagtctacagaactgtccaat
gagttgcgttttgaacggaatattgatgaggttgatacctcaatgaaaccttatgttcaa
ttaaatattgatctttatgaggatatcgcaactgaatcagtgggtgagattgagcgtgcg
catacattaaacgaaatggaatcatttaattcaggtaacgaagaagttagaatgcaaatc
gaacgtcagttagctttccgatatccatatcaaactgctatacatcaaccatctaaacaa
tcagtttctgagttgaaacgacaattagaaacagctcaaacagatacgaactatgatcgc
gttcgtcaatatcgtatcggtacgagaacatatgaacgacctgctttcttgagtcataca
aaagtacgtagagccaatgagattggtacgttgatgcatacagtaatgcaacacttacca
tttactgaagatggtttaacacgtgagcaactcttaaattacatcgaccgtttaattgat
aagaatattattaaagaagatgctaaaaaagatattcaaatagatgatattatgcatttt
atcgaaagtccgctatatcgcaaaattgcaaatagtgatgcaatctatcgtgaacttcca
tttgtagttaatcagaataaagtagataaaaggccagatgaccaagatgcttcaatcatt
caaggtatgattgatttaatctttgtaagtgacggtgaatattactttgtagactacaaa
acagatgctttcaatagacgtcgcagtatgacagatgaggaaataggtcaacaattgaaa
gatcgttataaaatacagatggcatattatagaaatacgttggagacaatattaaataaa
gaagtaaaaggatacctctatttctttaaatttggtcaactctcaattgattaa
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