Staphylococcus hsinchuensis: QQM35_07545
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Entry
QQM35_07545 CDS
T10123
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
shsi Staphylococcus hsinchuensis
Brite
KEGG Orthology (KO) [BR:
shsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shsi03032
]
QQM35_07545 (topA)
03400 DNA repair and recombination proteins [BR:
shsi03400
]
QQM35_07545 (topA)
Enzymes [BR:
shsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QQM35_07545 (topA)
DNA replication proteins [BR:
shsi03032
]
Prokaryotic type
DNA Topoisomerases
QQM35_07545 (topA)
DNA repair and recombination proteins [BR:
shsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QQM35_07545 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Porphyrn_cat_1
Cys_rich_CPXG
Motif
Other DBs
NCBI-ProteinID:
XAF69923
LinkDB
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Position
1509484..1511550
Genome browser
AA seq
688 aa
AA seq
DB search
MAENLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDVENDYEPKYITIRGK
GPVVKELKRHAKKAKKVYLASDPDREGEAIAWHLANILNIEDSKENRVVFNEITKDAVKD
SFKHPRGIEMELVDAQQARRMLDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFNPEEYWKIEGEFRYKRSKFNAKFLHLKDKPFKLPNKDEVDKITTQLDGDQFEVTK
VTKKEKTRQPSNPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKRKGTVGLITYMR
TDSTRISDQAKAEAKSFIEETYGKSYVSRRKAKGQGDQDAHEAIRPTSSNRTPSEMKQFL
TRDQYRLYKLIWERFVASQMAPAILDTVALDLTQNDIKFRANGQTIKFKGFMTLYVESKD
DNDNGKENKLPNIEEGEMVTATKIEPSQHFTQPPPRYTEARLVKTLEELKIGRPSTYAPT
IDTIQKRNYVKNESKRFVPTELGEIVNEQVKDYFPEIIDVDFTVNMETLLDKIAVGDIGW
KKVISDFYSSFKLDVERAEEEMEKIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNFP
DCRNTKAIVKEIGVKCPTCHKGEVVERKSKKNRVFYGCSRYPECDFVTWDKPVGRSCPKC
EHYLVEKKQRRKSQVVCSNCDYKEEEQK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaaaatttagtcatagttgaatcgcctgcaaaagctaaaaccattgaaaaatat
ttaggtaaaaaatataaagtcatcgcatcgatggggcacgtccgagatttgcctcgtagt
caaatgggtgttgatgttgaaaatgattatgaaccaaaatatattacaatacgtgggaag
ggcccagttgttaaagaattaaaaagacatgctaaaaaagcgaaaaaagtctatttagcg
agtgaccccgaccgtgaaggtgaagcaattgcttggcatttggcgaatattttaaacatt
gaggattcaaaagaaaacagagtagtatttaatgaaataacaaaagacgcagttaaagat
agttttaaacatccaagaggcattgagatggagcttgtagatgcacaacaagcacgtcgt
atgctagatcgacttgtaggatacaatatttcaccggttttatggaaaaaagttaaaaaa
ggtttatctgccggacgtgtacaatcagtggcactacgattagtgattgatcgtgaaaat
gaaattcgaaacttcaatccggaagaatattggaaaattgaaggtgaatttagatataaa
cgttctaaattcaatgctaaatttttacatttaaaagataaaccgtttaaattaccaaat
aaagatgaagtagataaaattacgactcaattagatggggaccaatttgaagtaacgaaa
gtcactaaaaaagaaaagacgcgtcaaccatctaatccatttactacttctacattacaa
caagaagcagcaagaaaattgaattttaaagcacgtaaaacaatgatgttagcccagcaa
ctatatgaaggtatcgatttgaaacgtaaaggtacagttggtttaattacgtatatgcgt
acagactctacacgtatttcagatcaagcaaaagcagaagctaagtccttcatcgaggaa
acttatggaaaatcttatgtctcccgtagaaaggctaaaggacaaggtgatcaagatgcg
cacgaggcgattagaccgacaagttcaaatcgtacgccaagcgaaatgaaacagttttta
actcgagatcaatatagattatacaagttaatttgggaacgtttcgttgctagtcaaatg
gcaccagctatactagatactgtagcgttagatttaactcaaaacgacattaaatttaga
gctaatggtcaaacgattaaatttaaaggtttcatgacgctttatgtagaatcaaaagat
gataatgataatggtaaagaaaataaactacctaatatcgaagaaggcgaaatggttaca
gcaactaagattgaaccttcacaacactttacgcagccacctcctcgctatacagaggca
cgtttagtcaaaacattagaagagttaaagatcggacgaccatcaacatatgcaccaaca
attgatacaattcagaaacgtaattacgttaaaaatgaaagtaaacgtttcgtaccaaca
gaattaggtgaaatcgtaaatgaacaagtgaaagattatttccctgaaattatcgatgta
gatttcactgtcaatatggaaacgcttttagataaaattgctgttggtgatattggttgg
aagaaagttatctctgatttttatagtagttttaaactagacgttgaacgtgcggaagaa
gagatggaaaaaattgaaataaaagatgaacctgcaggcgaagattgtgaagtttgtggt
tcccctatggtaattaaaatggggcgttatggtaaatttatggcatgctcaaatttccct
gattgtagaaatactaaagcgattgtaaaagaaattggagtaaaatgcccaacatgtcac
aaaggtgaagtcgtagaacgaaaatctaagaaaaacagagtattttatggttgttctaga
tatccagaatgtgacttcgttacatgggataaaccagtaggaagatcttgtcctaagtgt
gaacattacttagttgagaaaaaacaaagacgaaagagccaagtggtttgttcaaactgc
gattacaaggaagaagaacaaaaataa
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