Staphylococcus hsinchuensis: QQM35_07980
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Entry
QQM35_07980 CDS
T10123
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
shsi Staphylococcus hsinchuensis
Brite
KEGG Orthology (KO) [BR:
shsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shsi03400
]
QQM35_07980 (sbcC)
DNA repair and recombination proteins [BR:
shsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QQM35_07980 (sbcC)
Archaeal homologous recombinant proteins
QQM35_07980 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_15
Motif
Other DBs
NCBI-ProteinID:
XAF70008
LinkDB
All DBs
Position
1605287..1608316
Genome browser
AA seq
1009 aa
AA seq
DB search
MKPLVVKLKNFGPFLNETIDFRQLQENHLFLISGKTGSGKTMIFDAIVFALFGEASTKDR
KEGELRSHFADGKSPMIVEFEFKIRNQQFKIIRQDAFHKEGNKSPTLGQLSIYELVDNQY
KLIESKISSGKRYLIDLLGVNVEQFRQLFILPQGEFKRFLLSKSSEKQEILRTLFNSQRF
VDIQNKLSEDINEVKSHIEQQYQLLESNWQEINTFDNEILNAHKQITARQTQKILELLPE
YTEIGHSIKNELKQQKDFQSKMLKDAEIKLEKNLKLEEAFKNLKTKNEEYEKLITEESEI
KTKEKLVKELNEVRPIATLVDTQQKLLDKTAKTTTELEEKQNIVIDISKQLETHSIELNQ
YKTNNEEIEKKREFLNQCKLFYENAQKYQTSYHSLKQLTETYDEMANKYQQQQNKLNEQK
NKLNNRKADYSKIESLNEEIYKLTSHINELKQIDKRKEEHQQLAEETIQIEEKLEQSLNE
IQFLKDKYASIDKSNIDLNNKQEIIANIQSAIEVGEQCPICGHEVTEVEQHVDFEDISKR
HQEIAELENLLNQQQNKKIQYESELRIKREQLSKFETDIKTDTKTDDLENQLQNKENEKR
QLNEENKQVEQLKEHLQQLNQAEHDSQLKLKNIDHEIKQNEITIQDFEKTTQYQDVTLFV
QNYKHELKTVQDYDTSLSELERTVQNLTNKLSIEQNNVHFLSQNVSETKAELKQMDNQIN
SEMKKIGFDSIDQIKIVMERLPEKDKLERTIEQYKKNRQTLEIEIEQLKKQTENEQLEDI
TQLKSQLQEQQQSYEQIASQLSQHEYKVEFNETKIKIIKQMVEKLEEDLKEQQEIFQLSE
VLSGKNPQKLTLENYVLIHYLQRILIQANKRLDIMSGQRYQLVRRQQVSQGYSGLEIDVF
DNHSNRSRHITSLSGGETFQASLALALGLSEVVQEESGGISLDSMFVDEGFGTLDQETLE
TALDTLVGLKSTGRMVGIISHVSELKQRIPLILEVETKQYHSTTRFKMQ
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattagttgttaaattaaaaaactttggcccttttttaaatgaaacgatagac
tttcgacagttacaagaaaatcatttgtttttaattagtggaaagactggatcagggaaa
acaatgattttcgatgctattgtgtttgcattatttggtgaggcctcaactaaagataga
aaagaaggagaattacgcagtcatttcgcagatggtaaatcaccaatgatagtagaattc
gagtttaagattagaaatcaacaatttaaaatcattcgccaagatgctttccataaagaa
ggaaataaaagcccaacattaggtcaattatcaatttatgaattggtggataatcaatat
aaattgatagaaagcaaaattagtagtggaaaacgctatctaattgatttgttaggtgtt
aacgttgaacaatttcgtcagttatttattttgcctcaaggtgaattcaagagattttta
ctttctaaaagttcagagaaacaagagatattaagaacgttatttaatagtcaacgattc
gtagatattcaaaataaattatctgaggacattaatgaagtaaagtcccatatcgaacaa
caatatcaattattagaatcaaattggcaagaaatcaatacttttgataatgaaatactg
aatgcgcataaacaaatcacagctagacagacacaaaaaatactagaattattaccagaa
tatactgaaataggtcactcaattaagaacgaattaaaacaacaaaaagactttcaaagt
aaaatgcttaaagatgctgaaattaaattagaaaaaaatttaaagttagaagaggcattt
aaaaatttaaaaactaaaaatgaagagtacgaaaaactaataactgaagaatcagagata
aagacaaaagaaaaattagttaaagaacttaacgaagtaagacctattgcaacacttgtt
gatacccagcaaaagttattagacaaaactgcaaagacaacaactgaattagaagaaaag
caaaatattgttattgatatttcgaaacaactagaaacgcattcaatagaattaaatcaa
tataagacaaataatgaggaaattgagaaaaaaagagaatttttaaatcagtgcaaatta
ttttatgaaaatgctcaaaaatatcaaacatcatatcatagcttaaaacaattaactgaa
acatatgatgaaatggcgaataagtatcagcaacagcaaaataaattgaatgagcaaaaa
aataaattgaataataggaaagcagattattcgaaaattgaaagtttaaatgaagagatt
tataaattgactagccatattaatgaattaaaacaaatagataaaagaaaagaagaacat
caacaattagcagaagaaacaatacaaattgaagaaaaattagaacaaagtttaaatgaa
atccaatttttaaaagataaatatgcatcaattgataaatctaatattgatttaaataat
aaacaagaaattatagccaatatacaatctgctatagaagtaggtgagcaatgtcctatt
tgtggtcatgaagtaacagaagttgaacaacatgttgattttgaagacatatcgaaaaga
catcaagagattgcagaattagaaaatttattaaatcaacaacaaaataaaaaaattcaa
tacgagagtgaattacgtataaaaagggagcaactatcaaagttcgaaacagatatcaaa
acagacacaaaaactgatgacttagaaaatcaacttcaaaataaagaaaatgagaaacgg
cagttaaatgaagaaaataaacaagtcgagcaactcaaagagcatttacaacaacttaat
caagctgaacatgattcacaattgaaattaaaaaatatcgatcatgaaatcaaacaaaac
gaaattactatacaagattttgaaaaaacaacacaataccaagacgtaacgttatttgta
caaaattataagcacgagttgaaaactgtacaagactatgacacgtccttatctgaacta
gagcgcactgtgcaaaatttaactaacaaattatcaattgaacagaacaatgttcatttt
ctaagtcaaaacgtttctgaaacaaaagcagaattaaaacaaatggataaccaaatcaat
tcagagatgaaaaaaattggctttgattctattgatcagataaaaatcgtaatggaacgt
ttacctgaaaaagataaattggaacgcacaattgaacaatataagaagaatagacagacg
cttgaaatagaaattgagcaattgaaaaaacaaacagaaaatgaacaattagaagatatt
actcaactaaaatcacaactacaagaacagcaacaatcatatgaacaaattgcctcacaa
ctcagccaacatgaatataaagtagaatttaatgagacaaaaataaaaattattaaacaa
atggtggaaaagttagaagaagatttaaaagaacaacaagagatattccaattgtcagaa
gtattatcaggaaagaatccacaaaagctaactttagaaaattacgttttaattcattat
ttacaacgtatacttattcaagctaataaacgtttagatataatgtcaggacaaagatat
cagttagttagacgtcaacaagtttctcaaggttacagtgggttagaaattgatgttttt
gataatcattcaaatcgttcacgtcatattacttcattatcaggcggtgaaactttccaa
gcttctttagctttagcgcttgggctaagtgaagtcgtccaagaggaatcgggaggtata
tctcttgattcaatgtttgttgacgaaggattcggtactttagatcaagaaacactagag
acagctttagatacattagttggtttaaaatcaacaggtagaatggttggcatcatatct
catgtgagcgaattaaaacaacgtatcccattgattttagaagtagaaacaaagcaatat
catagtacaacgcgtttcaaaatgcagtga
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