Staphylococcus hsinchuensis: QQM35_09575
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Entry
QQM35_09575 CDS
T10123
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shsi Staphylococcus hsinchuensis
Pathway
shsi03030
DNA replication
shsi03410
Base excision repair
shsi03420
Nucleotide excision repair
shsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQM35_09575 (polA)
03410 Base excision repair
QQM35_09575 (polA)
03420 Nucleotide excision repair
QQM35_09575 (polA)
03440 Homologous recombination
QQM35_09575 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shsi03032
]
QQM35_09575 (polA)
03400 DNA repair and recombination proteins [BR:
shsi03400
]
QQM35_09575 (polA)
Enzymes [BR:
shsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QQM35_09575 (polA)
DNA replication proteins [BR:
shsi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QQM35_09575 (polA)
DNA repair and recombination proteins [BR:
shsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QQM35_09575 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QQM35_09575 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XAF70311
UniProt:
A0ABZ3EBW4
LinkDB
All DBs
Position
complement(1922734..1925364)
Genome browser
AA seq
876 aa
AA seq
DB search
MNKLVLIDGNSLSFRAFYALPLLQNKAGIHTNAIYGFAMLLEKILKEEQPTHFLVAFDAG
KTTFRHETYGEYKGGRQKTPPELSEQFPYVRQLLDAYQIKRYELENYEADDIIGTLSTKA
SNENFETIIITGDRDLTQLATDNVTIYYTKKGVTDVDHYTPQFIAEKYDGLEPKQIIDMK
GLMGDTSDNIPGVAGVGEKTAIKLLKQFSTVENVYDNIDDVSGKKLKEKLANSKDDALMS
KELATINVESPVEVSLADTKLPVEPDTNDKIELFKKLEFKQLLDQMDAQSETQDTEAKEI
SVITEFNDVDFNKLTSAAIHFEIDGINYLKEDILKFGLFDGTNHYVIDAKQINEYPQLVQ
WLESDKTEKIVYDAKKTYVAAHRLEIDVKNIQFDIMLASYIIDPSRSIDDVHSVVTHFGQ
HYVQSTVSIYGKGKKRQVPEDETLNYHIATITEAISESQKYMEQQLEEYNQTDLLNDLEL
PLARILSKMEEIGIYTDVDDLKQMEQEIQSKLDVLIDNIYEAAGESFNINSPKQLGVVLF
ETLKLPVIKKTKTGYSTAVDVLEQLQGEHPIIDHILEYRQLSKLQSTYVEGLQKVISDDQ
RIHTRFNQTLAQTGRLSSIDPNLQNIPVRLEEGRKIRKAFKSTDKNNVIFSADYSQIELR
VLAHITQDESMKKAFINDEDIHTATAMKVFGVDADEIDSNMRRQAKAVNFGIVYGISDYG
LSQSLGITRKAAKKFIDDYLDSFPGVKQYMEDVVKDCKAQGFVETLLHRRRYIPDITSRN
FNLRSFAERTAMNTPIQGSAADIIKLAMVNFDREIEKTDFNAKLLLQVHDELIFEIPKDE
VESFEPFIEEIMDNALKLDVPLKVESSYGQTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtcttaattgatggtaatagtttaagctttagagcattttatgcatta
ccactgctacaaaataaagctggcattcatacaaatgcaatatacggttttgcaatgttg
cttgaaaaaattttaaaagaagaacagcctacacatttcttagtggcattcgatgctggt
aaaactacttttagacatgaaacgtatggtgaatacaaaggcggacgtcaaaagacgcca
ccagagttaagtgagcaattcccatatgtgcgccaattattagatgcatatcaaattaag
cgttatgaattagaaaattacgaagctgatgacatcatcggtacattaagtacaaaggca
agtaatgaaaattttgagacgatcattattacgggcgatcgagatttaacgcaacttgct
acagataatgtaacgatttattacactaaaaaaggtgtgactgatgtcgatcactatacg
cctcaatttatcgctgaaaaatatgatgggttagaaccgaaacaaattattgatatgaaa
ggtttaatgggagacacttcagataacataccaggtgttgctggtgtaggtgaaaagacc
gctattaaattattaaagcaattttcaactgtagaaaatgtctatgacaatattgatgat
gtatcaggtaaaaaactaaaagagaaattagccaatagtaaagatgatgcgttaatgagt
aaagagcttgcaaccattaatgtagaaagtccagttgaagtatcattagcggatacaaaa
ttaccggtcgaaccagatacaaatgacaagattgaattattcaagaaattagaattcaaa
cagttgttagatcaaatggatgcacaaagtgaaacgcaagacacagaagcaaaggaaatt
agcgttataactgagtttaatgacgtagattttaataagctaacttctgccgcgatacat
tttgaaattgacggtatcaactatttaaaagaagacattttaaaattcggactgttcgat
ggtacaaatcattacgttatcgatgcaaaacaaattaatgagtaccctcaattagttcaa
tggttagaaagtgataaaactgaaaaaatcgtttatgatgcgaagaaaacttatgtggca
gcacaccgcttagagattgacgtgaaaaatattcaatttgatattatgttggcgagttat
attattgatccatctcgaagtatcgatgatgtgcactcagtagtaacacatttcggtcaa
cattacgtgcaatccactgtctcgatttacggtaaaggtaagaagcgtcaagttccagaa
gatgagacattaaattatcacattgctacgattactgaggcaatatctgaatctcaaaaa
tatatggaacaacaattagaagaatacaaccaaactgatttacttaatgatttagagtta
ccattggctcgcattttaagcaaaatggaagagattggtatttacactgatgttgatgat
ttgaaacaaatggaacaagaaatccaaagtaaattagacgtcttaattgataatatatac
gaagcagcaggtgaatcatttaatattaactcaccaaaacaattaggtgtcgtgttattt
gaaactttaaaactaccagtaattaaaaagaccaaaactggatattctacggcagtagat
gtgctagaacaattacaaggtgaacatccaatcattgatcacatcttagaatatcgtcaa
ctatcaaagttacaatctacgtatgtagaagggttacagaaagtaattagtgatgatcaa
cgcatacacacacgctttaaccagacgttagcacaaacgggaagattatcatcaatcgat
ccaaatttacaaaacattccagttcgtctagaagaaggtagaaaaattagaaaagcattc
aaatcaacagataaaaataatgtaattttctcagcggactattcacaaattgaattacgc
gtattagcgcatattacccaagatgaaagcatgaagaaagcattcataaatgatgaagat
attcatacggctacggcaatgaaagtatttggcgttgacgctgatgaaattgattcaaat
atgcgtagacaagcaaaagctgtaaacttcggtatagtttacggaattagtgattatggt
ttaagtcaaagtttaggcattacgcgtaaagcagctaaaaaatttatagatgattattta
gatagtttcccaggcgttaaacaatatatggaagatgtcgtaaaagactgtaaagcacaa
ggctttgtagaaacattgcttcatcgacgtcgttatattccagatattacaagtcgaaac
tttaatttaagaagttttgcggaaagaactgcaatgaacacaccaattcaaggtagcgct
gcagatattattaaattagccatggtgaactttgatcgtgaaattgagaaaacagatttt
aatgctaaattattattgcaagttcatgacgaattaattttcgaaattcctaaagatgag
gtcgaatcattcgaaccatttattgaagaaattatggataatgctttaaaattagatgtc
ccactcaaagtagaatcaagctatggacaaacgtggtacgatgcaaaatag
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