KEGG   Sphingobacterium sp. ML3W: KO02_01240
Entry
KO02_01240        CDS       T03258                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
sht  Sphingobacterium sp. ML3W
Brite
KEGG Orthology (KO) [BR:sht00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sht03400]
    KO02_01240
DNA repair and recombination proteins [BR:sht03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     KO02_01240
SSDB
Motif
Pfam: AAA_25 ATPase Zn_ribbon_LapB ChlI DnaB_C AAA Lon_C AAA_22 AAA_24 AAA_16 NTPase_1 AAA_14 AAA_5 nSTAND3 ABC_tran CobU SLFN-g3_helicase NACHT RNA_helicase DUF7129 divDNAB AAA_18 DZR
Other DBs
NCBI-ProteinID: AIM35440
UniProt: A0A088EW74
LinkDB
Position
247009..248394
AA seq 461 aa
MAKTKSAYFCQSCGFESAKWLGQCPSCKQWNSLVEEIVEKASSKVPEWRSTSLTSSPKRA
NKAAVIHEIVYQDESRILTPDQEFNRVLGGGIVPGSLVLIGGEPGIGKSTLMLQLALSIP
QVKTLYISGEESEQQIKMRAERLSQSSNANCYILTETSTQNIFKQIEIVQPDVIVIDSIQ
TLHSSQIESAPGSVSQVRECTAELLRFAKETSTPVLIVGHITKDGSIAGPKVLEHMVDTV
LQFEGDRHHVYRILRAVKNRFGSASELGIYEMQGTGLREVSNPSEIMISQRDAPVSGVSI
AAMLEGARPMMIEVQALVSNSAFGNPQRTSTGFDTKRLSMLLAVLEKRFGFRLSAQDVFL
NIAGGLRVEDPAIDLAVIVAIISSQQDIAVKTSMTFAGEVGLSGEIRAVNRIEQRIAEAE
KLGFEGIFISKFNTKGLDAKKYNIAIRPIATLEDVFRALFG
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggcaaagacaaaatcagcatatttctgtcaaagttgtgggtttgaatctgcaaaatgg
ttgggacagtgtccttcctgtaaacaatggaattctctcgtagaagaaattgtagagaaa
gcaagttcgaaagttccagaatggcgaagtacctccttaacctcatctcctaagcgagca
aataaagccgcagttatccatgagattgtgtatcaagatgaatcacgtattttaactccc
gatcaggaatttaaccgtgtattaggtggggggatagtcccaggatctttagtactgata
ggtggtgaaccgggcattggtaaatctaccttaatgttacaattagccttatcgattcca
caggtaaagactttatatatttctggagaagaaagtgagcagcagatcaagatgagagcc
gagcgtctatcacaatcttccaatgcgaactgttatatattgaccgaaacttcaacacaa
aatatattcaagcagattgaaatcgtacaacccgatgtcatcgttatcgattccattcaa
acgctacattcttctcaaatagaatcagcaccaggttcggtatcgcaggtaagagagtgt
acagcagaattgttgcggtttgcaaaagaaacgagtacaccagttttgattgtagggcat
attacaaaagacggctctattgctgggcccaaggtgttagaacatatggtagatacggtc
ctgcagtttgagggtgatcgacaccatgtataccgtatattgagagcagtgaaaaaccgt
tttggttcagcatcagaattgggtatatatgagatgcaaggtactggtctgagagaagta
tccaatccttctgaaatcatgatctcgcaacgagatgcacctgtaagtggggtatcgatt
gcagccatgttagaaggtgctcgtccaatgatgatcgaggtacaggcattggttagtaat
tctgcttttggaaatccacagcgtacgtccacaggtttcgataccaaaagattaagtatg
ctacttgcagtactggagaaacgatttggttttcgtctgagtgcacaggatgttttccta
aatattgcaggaggattgcgcgttgaagatccagcaatagatttggctgtcattgttgct
atcatatcttcacaacaagatattgctgtgaaaacgagtatgacttttgctggtgaagta
ggtttatctggagagattcgagcagtgaaccggatagagcaacgtattgcggaagctgaa
aaattgggttttgagggtatttttatttcaaaatttaatacaaaaggcttagatgctaaa
aaatataatattgcaatccgtcctattgcgacgcttgaagacgtatttagggctttattt
ggataa

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