Sphingobacterium sp. ML3W: KO02_01240
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Entry
KO02_01240 CDS
T03258
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sht
Sphingobacterium sp. ML3W
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sht03400
]
KO02_01240
DNA repair and recombination proteins [BR:
sht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KO02_01240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA
Lon_C
AAA_22
AAA_24
AAA_16
NTPase_1
AAA_14
AAA_5
nSTAND3
ABC_tran
CobU
SLFN-g3_helicase
NACHT
RNA_helicase
DUF7129
divDNAB
AAA_18
DZR
Motif
Other DBs
NCBI-ProteinID:
AIM35440
UniProt:
A0A088EW74
LinkDB
All DBs
Position
247009..248394
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AA seq
461 aa
AA seq
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MAKTKSAYFCQSCGFESAKWLGQCPSCKQWNSLVEEIVEKASSKVPEWRSTSLTSSPKRA
NKAAVIHEIVYQDESRILTPDQEFNRVLGGGIVPGSLVLIGGEPGIGKSTLMLQLALSIP
QVKTLYISGEESEQQIKMRAERLSQSSNANCYILTETSTQNIFKQIEIVQPDVIVIDSIQ
TLHSSQIESAPGSVSQVRECTAELLRFAKETSTPVLIVGHITKDGSIAGPKVLEHMVDTV
LQFEGDRHHVYRILRAVKNRFGSASELGIYEMQGTGLREVSNPSEIMISQRDAPVSGVSI
AAMLEGARPMMIEVQALVSNSAFGNPQRTSTGFDTKRLSMLLAVLEKRFGFRLSAQDVFL
NIAGGLRVEDPAIDLAVIVAIISSQQDIAVKTSMTFAGEVGLSGEIRAVNRIEQRIAEAE
KLGFEGIFISKFNTKGLDAKKYNIAIRPIATLEDVFRALFG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacaaaatcagcatatttctgtcaaagttgtgggtttgaatctgcaaaatgg
ttgggacagtgtccttcctgtaaacaatggaattctctcgtagaagaaattgtagagaaa
gcaagttcgaaagttccagaatggcgaagtacctccttaacctcatctcctaagcgagca
aataaagccgcagttatccatgagattgtgtatcaagatgaatcacgtattttaactccc
gatcaggaatttaaccgtgtattaggtggggggatagtcccaggatctttagtactgata
ggtggtgaaccgggcattggtaaatctaccttaatgttacaattagccttatcgattcca
caggtaaagactttatatatttctggagaagaaagtgagcagcagatcaagatgagagcc
gagcgtctatcacaatcttccaatgcgaactgttatatattgaccgaaacttcaacacaa
aatatattcaagcagattgaaatcgtacaacccgatgtcatcgttatcgattccattcaa
acgctacattcttctcaaatagaatcagcaccaggttcggtatcgcaggtaagagagtgt
acagcagaattgttgcggtttgcaaaagaaacgagtacaccagttttgattgtagggcat
attacaaaagacggctctattgctgggcccaaggtgttagaacatatggtagatacggtc
ctgcagtttgagggtgatcgacaccatgtataccgtatattgagagcagtgaaaaaccgt
tttggttcagcatcagaattgggtatatatgagatgcaaggtactggtctgagagaagta
tccaatccttctgaaatcatgatctcgcaacgagatgcacctgtaagtggggtatcgatt
gcagccatgttagaaggtgctcgtccaatgatgatcgaggtacaggcattggttagtaat
tctgcttttggaaatccacagcgtacgtccacaggtttcgataccaaaagattaagtatg
ctacttgcagtactggagaaacgatttggttttcgtctgagtgcacaggatgttttccta
aatattgcaggaggattgcgcgttgaagatccagcaatagatttggctgtcattgttgct
atcatatcttcacaacaagatattgctgtgaaaacgagtatgacttttgctggtgaagta
ggtttatctggagagattcgagcagtgaaccggatagagcaacgtattgcggaagctgaa
aaattgggttttgagggtatttttatttcaaaatttaatacaaaaggcttagatgctaaa
aaatataatattgcaatccgtcctattgcgacgcttgaagacgtatttagggctttattt
ggataa
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