Sphingobacterium sp. ML3W: KO02_04620
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Entry
KO02_04620 CDS
T03258
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sht
Sphingobacterium sp. ML3W
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sht03032
]
KO02_04620 (gyrB)
03400 DNA repair and recombination proteins [BR:
sht03400
]
KO02_04620 (gyrB)
Enzymes [BR:
sht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KO02_04620 (gyrB)
DNA replication proteins [BR:
sht03032
]
Prokaryotic type
DNA Topoisomerases
KO02_04620 (gyrB)
DNA repair and recombination proteins [BR:
sht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KO02_04620 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AIM36051
UniProt:
A0A088EUC0
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All DBs
Position
1010653..1012611
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AA seq
652 aa
AA seq
DB search
MSEENKNASSYSADNIQVLEGLEAVRKRPSMYIGDTGVKGLHHLVYEVVDNSIDEAVAGY
CTDIFVTIHTDNSISVKDNGRGIPTGINKKENRSALEIVMTVLHAGGKFDKDTYKVSGGL
HGVGVSCVNALSAHLSAVIHRDGKVFQQEYEKGKPLYTVKEIGESDITGTIVTFRPDQEI
FTTTTIYNYDTLASRLRELSFLNKGLKLSLVDERETLEDGTLRQDVFLSEGGLQEFVQFL
DSNRHPIIPHPIYVEGIKQGIPVELALQYNETYTENVHSYVNNINTIEGGSHVAGFRRGL
TRTLKAYADKSGLLKNLKIEITGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVMGAV
DIAVGEILNIYLEENPREAKAIVQKVVIAAQARAAARKARDLVQRKTVMGGSGLPGKLAD
CQDNDPTKCEIYFVEGDSAGGTAKSGRDRKYQAIMPLRGKILNVEKAMEHKIYENEEIKN
MFTALGVSLGTADDPKALNLDKLRYHRIIIMTDADVDGSHITTLILTFYFRYMKELIEKG
YIYIATPPLYLVKKGKEFQYAWNEDQRLNAIQQLKGGGKEDSVHVQRYKGLGEMNAEQLW
DTTMNPETRTLRQVTIENAAECDRIFSMLMGDEVAPRREFIERNARYAKIDI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacaaaaatgcatcatcctattcagccgataatatccaagttttagag
ggattagaggctgtacgtaaacgcccttccatgtatattggagacactggggttaaaggt
ttgcaccatttggtctatgaggtagtcgataactctatcgatgaagccgttgcaggttat
tgtacagatatttttgtcactatccatacagacaattctatttctgtaaaagataacgga
cgtggtattccaacaggtatcaataaaaaagaaaatagatccgcactggagattgtaatg
actgtattacacgccggtggtaaatttgataaagatacttataaagtatcaggtggtctt
cacggtgtgggggtttcttgtgtaaacgctttatcagcgcatttatctgcagtgatccat
cgtgatggtaaggtatttcagcaagaatacgaaaaagggaaacctttatatacggtaaaa
gaaattggtgaatcagatataacaggaactattgttacttttagacctgaccaagagatt
ttcacaactaccactatttataattatgataccctagcaagtcgacttcgcgagctgtct
ttcttgaataagggacttaaattatctttagtagatgaaagagaaaccttagaagatggt
actttacgtcaagacgtatttttatctgaaggcggtttacaagagtttgtacagttttta
gatagcaatcgtcatccgataataccacatccaatttatgtggaaggtattaaacaaggt
attcctgtagaattagcgttgcaatataacgagacttatacagagaatgtacattcgtac
gtgaataacatcaataccattgaaggtggttctcacgttgctggttttcgtcgtggtttg
acacgtaccttaaaagcgtatgctgataagtctggcttattgaaaaatttgaagattgaa
ataactggagatgatttccgagagggtttgactgcggtgatttcggttaaggtagcagaa
cctcagtttgaggggcaaaccaaaacaaaattaggtaactcagaagtaatgggtgctgtt
gatatcgctgtgggtgaaattttaaatatttatttggaagaaaaccctagagaagcaaaa
gcaattgtacaaaaagttgttatcgctgctcaagctcgtgctgctgctcgtaaagcgcgc
gatttagtacaacgaaaaacagtaatgggtggttctggtttaccaggaaaattggctgat
tgtcaagataatgaccctactaaatgtgagatttatttcgtcgagggagattcagctggt
ggtacagcaaaatctggtcgtgaccgaaaatatcaagcgattatgccgctacgtggtaaa
atcctaaacgtagaaaaggcaatggaacataaaatctatgaaaatgaagagatcaaaaat
atgtttactgccctgggtgttagtttgggtactgcggatgatcccaaagctttaaattta
gataaattacgctatcatcgcatcattattatgaccgatgcggacgtagatggttctcac
attacgactcttatcctaacattttattttaggtatatgaaagagttgattgagaagggg
tatatctacatcgcaacgccacctttatatttagtgaaaaaaggtaaggaatttcaatat
gcttggaacgaagaccaacgcttaaatgctattcagcaattaaagggtggaggtaaagaa
gatagtgtacatgtacagcgctataaaggtcttggagaaatgaacgcagaacaactatgg
gatacaactatgaatcctgagacgcgtacattacgtcaagtaacgatagaaaatgctgct
gaatgtgatcgtatattctcaatgctaatgggcgatgaagttgctccacgtcgtgagttt
attgaacgaaatgcacgttatgctaagatagatatctaa
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