Sphingobacterium sp. ML3W: KO02_05490
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Entry
KO02_05490 CDS
T03258
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sht
Sphingobacterium sp. ML3W
Pathway
sht00061
Fatty acid biosynthesis
sht00071
Fatty acid degradation
sht01100
Metabolic pathways
sht01212
Fatty acid metabolism
sht02024
Quorum sensing
sht04146
Peroxisome
Module
sht_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KO02_05490
00071 Fatty acid degradation
KO02_05490
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KO02_05490
09145 Cellular community - prokaryotes
02024 Quorum sensing
KO02_05490
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sht01004
]
KO02_05490
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sht04147
]
KO02_05490
Enzymes [BR:
sht01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KO02_05490
Lipid biosynthesis proteins [BR:
sht01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KO02_05490
Exosome [BR:
sht04147
]
Exosomal proteins
Exosomal proteins of breast milk
KO02_05490
Exosomal proteins of breast cancer cells
KO02_05490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Exo_endo_phos_2
PapA_C
Motif
Other DBs
NCBI-ProteinID:
AIM36208
LinkDB
All DBs
Position
complement(1234573..1236342)
Genome browser
AA seq
589 aa
AA seq
DB search
MAQQSRIFDLLTNYKSEYSNKTIIAGRDKNAHWQTYQTDEFITKINNLSKALLDIGLQKG
DRVALMSGNRPEWSIVDFACNQLGIALVPLYPTLAPQDLSYIVNDAEVKLIFVSNTDLSE
RVDTALNDHQLTIPIYSFDYTAHHKDLDSLFEIGEKLSTDLKPYNDAIQEDDLLTLIYTS
GTTGKPKGVYLSHKNILSNVQACNHLIRPDFKKAISFLPLCHIFERMVVYMYYSKGVEIY
FCETLDNVVVDINDVKPDLFTTVPRVLEKVYDKIVSKGKDLTGIKKSLFMWALDLGLRYQ
EPAKNSAWYNFQLAIARKLIFSKWKEALGGNIKIIVSGGAALQERLARVFWAADMKVLEG
YGLTETSPVIAVNTFMDTGIKFGTVGRPLKNLEVKIAPDGEILVKGPSITSGYYKNDEAT
KETFDENGFLKTGDIGEISSDGFLKITDRKKEMFKTAGGKYIAPQAIETKLMESTLIAQI
MVLGENRKFPSALIVPAFEEIEKWMKFKGIAVVSKEETIKNPKVIEKYNQEIERLSTEFG
HWEKIKKFILLPKEWTIDDGQLTPKLSLKRKVILKEFDEKIEEMYQELS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaaagtagaatttttgatctcctaaccaactataaatccgaatattcgaat
aaaactattattgctggccgcgataaaaatgcacattggcaaacctatcaaaccgatgaa
tttattactaaaataaacaatcttagtaaagcattattggacatcggattgcaaaaaggt
gatcgtgtagccctcatgtcaggaaatcgaccagaatggagtatcgtggattttgcctgt
aatcaattggggattgcgcttgtgccgctatatccaacattagcaccacaagacctttca
tacatcgtcaacgatgcagaagttaagttaatatttgtgagcaatacagatctttctgag
cgtgttgacactgcgctgaacgaccatcaactgaccattccgatctattccttcgactac
acagcgcatcataaagacctggatagcctatttgaaatcggtgaaaaactaagcacagat
ttaaaaccatacaacgatgccatccaagaggatgatttattgacattgatctatacatca
ggaacaacagggaaaccgaaaggggtatacctatcccataaaaatattttaagtaatgta
caggcttgtaaccacctcataagacccgatttcaaaaaagcaatcagctttttaccttta
tgccatattttcgaacgtatggtcgtctatatgtattactcaaaaggtgtagagatttat
ttttgcgaaacactggataatgtagtcgtcgatatcaatgatgtcaaaccagatcttttt
acaacagtaccacgtgtattggaaaaagtgtatgataaaattgtttccaaagggaaagat
ttaacaggaatcaaaaaatcattattcatgtgggcccttgacctaggactgcgctatcaa
gaaccagcaaaaaatagtgcttggtacaattttcaactcgctatcgctcgcaaattaatt
ttttcgaaatggaaagaagcattaggtggtaatataaaaataatcgtttcaggaggagca
gcattacaagaaagactagcacgtgttttctgggcagcagatatgaaagtgttagaaggc
tacggacttacagaaacttctcccgttatcgcagtcaatacatttatggatacaggtatc
aagtttggaactgtagggcgaccactcaaaaacctagaagtaaaaatagcaccagacggg
gagattcttgttaaggggccaagcatcacttctggttattacaaaaatgatgaagccaca
aaagaaacatttgatgaaaatggatttttaaaaacaggagatataggagaaatatcatcc
gatggatttttaaagattacggaccgtaaaaaagagatgtttaaaaccgcaggtggaaaa
tacatcgctccacaagcaattgaaacaaagctgatggaatccacgcttattgcacagatt
atggtactgggagaaaatagaaaatttccttcggcattaattgtacccgcatttgaagaa
atcgaaaaatggatgaaatttaagggaatagctgttgtttcaaaagaggaaacaattaaa
aacccaaaagtaatcgaaaaatacaaccaagagatcgagcgtttatcaacagaatttggt
cactgggaaaaaataaaaaaattcatattacttcccaaagaatggacaatagacgatggc
caattaacgccaaaactaagtctgaaaaggaaagttatactcaaagagtttgacgaaaaa
attgaagaaatgtatcaagaacttagctaa
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