Sphingobacterium sp. ML3W: KO02_08135
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Entry
KO02_08135 CDS
T03258
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sht
Sphingobacterium sp. ML3W
Pathway
sht00300
Lysine biosynthesis
sht00470
D-Amino acid metabolism
sht01100
Metabolic pathways
sht01110
Biosynthesis of secondary metabolites
sht01120
Microbial metabolism in diverse environments
sht01230
Biosynthesis of amino acids
Module
sht_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
sht_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KO02_08135
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KO02_08135
Enzymes [BR:
sht01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KO02_08135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIM36681
UniProt:
A0A088EW55
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All DBs
Position
1822588..1823751
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AA seq
387 aa
AA seq
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MKNKNIESQFIGKETPFYYYDLNVLEDTLDAAIAASSKRGFHVHFAVKSNFNSRLLEMIQ
AKGFGADCVSGNEVQRAIDAGFDAKMITFAGVGKSDKEINLALEHDIFAFNVESIQELEV
INELAAVKGRKAKVALRINPNVDANTHHYITTGLDENKFGVTNAELERAAAVIRTCENIE
LIGLHFHIGSQITDMNVFKSLCVKVNEWKNWFEERGVPIKVLNVGGGLGVDYHNPDKNAI
PDFESYFDIFEKFLERTPQQEVHFELGRALVAQCGSLISKVLYVKNGVKKNFLILDAGMT
ELMRPALYQAFHKIEKLGEEVASDIINYDVVGPICESSDCFGKEVPLPLSRRGDLIAIRT
AGAYGEVMSSRYNLREEIRYVYSDELA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaaaaatatagagagccagttcattggaaaggaaacacctttctactattat
gacctgaacgtgttagaagatacgttagatgcagcaattgctgcttcgagtaaacgtggg
tttcatgtgcattttgctgtgaaatctaatttcaatagccgtcttctcgagatgatacaa
gctaaaggatttggagcagactgtgtgagtggtaatgaggtgcaacgtgcaattgatgca
ggttttgacgctaaaatgatcacttttgccggtgttggtaagtctgacaaggagattaat
ctagcgctagaacatgatattttcgcttttaacgtggaatcgatccaagagttggaagta
atcaatgaactggctgcagtaaagggacgtaaggctaaagtagctttgcgtattaaccca
aatgtggatgcaaatacgcatcattacattacgactggattagatgagaataagtttggt
gtcactaatgcagagcttgagagagctgcggcagtcattcgaacttgtgaaaacatcgaa
cttattggccttcactttcatattggttcacaaataacagatatgaatgtgtttaaaagt
ttgtgtgtcaaggtgaatgaatggaagaattggtttgaagagcgaggtgtcccgatcaag
gtactgaacgtgggggggggattgggtgtggattaccacaatccagataaaaatgctatt
cctgactttgaatcatattttgatatctttgaaaagtttttggagagaacgccacagcag
gaggttcattttgaattaggtcgtgctttagtggctcaatgtggttcgttgatcagtaag
gttctgtatgttaaaaatggtgtcaagaagaactttttgatattagatgcaggtatgact
gagttgatgcgtcctgctttgtaccaggcttttcataaaattgaaaaactaggtgaagaa
gtagcttcggatatcattaattatgatgtcgtgggaccaatttgtgaaagttcagattgt
ttcggtaaggaagtgcctttacctctttctagaaggggcgacttaatcgctatccgtaca
gctggagcgtatggtgaagtgatgtcttcacgatataatctgagagaagaaattcgttac
gtttatagtgacgaattagcgtag
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