Sphingobacterium sp. ML3W: KO02_08665
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Entry
KO02_08665 CDS
T03258
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sht
Sphingobacterium sp. ML3W
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sht03016
]
KO02_08665
Enzymes [BR:
sht01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KO02_08665
Transfer RNA biogenesis [BR:
sht03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KO02_08665
Prokaryotic type
KO02_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIM36760
UniProt:
A0A088EZY8
LinkDB
All DBs
Position
complement(1928533..1929270)
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AA seq
245 aa
AA seq
DB search
MENNEKDQIEQAFSFAEGQMLLIDKPLTWTSFDVVGKIRNSIKPLKIKVGHAGTLDPLAT
GLLIVCTGKFTKKIDSYQAEDKEYTGTITLGGTTPSYDLETEVDETFPTDHITEQMIHDA
AKSFEGDIDQYPPAHSAIKINGERIYEKARRGETVELKTRKVSINSFIIEKIEMPIVHFR
VSCSKGTYIRSLAYDFGKTLHSGGHLSSLRRTKSGEYHVDKAWYLEELIHKIKAHKEISL
TAPQA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaacgaaaaagatcaaatagaacaggcattttcatttgccgagggtcaaatg
ttattgatagataaaccgcttacttggacaagttttgatgtggttggtaaaatccgaaac
tcaatcaaacctctaaaaataaaagtagggcatgcaggtacattagatccattagcaaca
ggattgttaatcgtatgtacaggtaaattcacgaaaaaaatagacagctaccaagcagaa
gacaaagagtataccggcacgatcaccttaggtggtactaccccctcttacgatctcgaa
acagaagttgatgagacctttccaaccgatcacattacggaacagatgattcacgatgct
gcgaagagttttgagggtgatatagaccaatatcctcccgctcattcagctatcaagata
aacggagaacgtatttatgaaaaagcacgtcgtggtgaaacagtcgaattaaaaactcga
aaagtatccatcaatagctttatcatcgaaaaaatcgaaatgccaattgtccattttaga
gtatcctgtagtaaaggaacgtatatacgctcactcgcttacgactttggaaaaacactc
catagcggtggtcatctcagctcgttaagaaggaccaaaagcggcgaataccatgttgat
aaagcatggtatttagaagaattaatccacaaaataaaggctcacaaagaaattagttta
acagcacctcaggcttaa
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