KEGG   Sphingobacterium sp. ML3W: KO02_10550
Entry
KO02_10550        CDS       T03258                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sht  Sphingobacterium sp. ML3W
Brite
KEGG Orthology (KO) [BR:sht00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sht03400]
    KO02_10550
Enzymes [BR:sht01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KO02_10550
    5.6.2.6  RNA 3'-5' helicase
     KO02_10550
DNA repair and recombination proteins [BR:sht03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KO02_10550
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII DUF4709
Other DBs
NCBI-ProteinID: AIM37085
LinkDB
Position
2401774..2404266
AA seq 830 aa
MKKTVGYQKVLKWLKVNKKKPFPFQEKTWEAYLAGYSGLLNAPTGFGKTYAVFLAPIIAY
LNEGPIPKKAKLGLRVIWITPLRSLSKDLARAMEEALFQLDIGWRVGVRNGDTSVSEKQK
QKRAMPQVLLITPESLHLLLAQKNTEAIFDNLSCIVADEWHELLGSKRGVLVELALSRIK
GILRFRENRVLQIWGISATIGNLEEALAVLQPDAAVLKTIVKADFEKKIQIQSIIPETIE
MLPWAGHLGIKLADKLIPVIKKSRTTLVFTNTRSQAEIWFQHLLKIHPDFAGQIAIHHGS
IDHELRNWIEDALHTGILKVVICTSSLDLGVDFKPVDTVVQVGSPKGVARFLQRAGRSGH
SPFETSKIYFMPTHALELLEVAAIKTAAKTGQIESREPFVLTFDVLIQYLVSLAVGSGFD
DKIIFDEVKNTFAFADLLEEEFQWSMHFITQGGSSLHAYPEFHKVVLDEADGLWKVTSRQ
IAMRHRLHIGTIVSDAMLKVKFMKGGYIGMIEEYFVSKLKAGDRFNLAGRSLEFVMVRDM
LVLVRKSNHKKAITPSWQGGRLPLSSNLGAILRTKYSQVLEGNEEEEELKVIKPLFQLQE
AITHVPLVDEFLVELIKTREGYHLFAYPFEGRLVHEVMAALVAYRISKLMPITFSIAMND
YGFELLSDQQIPMDDAIVYEVFSPENLSEDINASINATEMAKRKFRDIACISGLVFQGYP
GKYIKNKQIQSSSSLFFDVFESYDPRNLLLRQAYDENFHYQLEEPRLMMALQRIQKSAII
LKTATRFTPFSFPIKVDSMRESMSSEELEARIERMKAEVFKDLDKDGEPN
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgaaaaaaactgttggctatcaaaaggtcttaaaatggcttaaggtaaataagaagaaa
ccctttccatttcaggaaaaaacctgggaagcttacctcgcgggttatagcggtctactg
aatgcgcctacaggttttgggaaaacctacgctgtctttttggctccgatcatcgcctat
ctgaatgaagggcctatacctaaaaaggctaagcttgggttgcgtgttatctggattaca
ccattgcggtcattgtccaaagatttagctcgtgctatggaagaggctttatttcaactg
gatatcggatggcgagtaggggtgcgcaatggcgatacttcggtgtctgaaaagcagaaa
caaaaacgtgcgatgccccaagtactattgattacacctgaaagtctacatcttcttctg
gcacaaaaaaacacggaagccatttttgataatctttcctgtatcgtagcagatgaatgg
cacgaattattggggagtaagcgtggcgtgcttgtcgaattggcgctttcgcggataaag
ggaatcctacgatttcgggaaaacagggtgctacagatttgggggatttcggcgactatc
ggtaatcttgaagaagcattggcagtgttacaaccggatgctgcggtcttaaaaacgatt
gtaaaagccgattttgagaaaaaaattcagatacaatcgatcattccggagacaatcgag
atgttgccttgggcagggcatttgggtatcaagctggcggataaattgattcccgttatc
aaaaaaagcagaacgacattagtctttacaaatacgagaagccaagctgaaatctggttt
caacatcttttgaagatccacccagattttgcgggacagatagccatacatcatggctct
attgatcatgaactgcgtaactggattgaagacgcgcttcatactggcatcttaaaggtc
gttatttgcacttcttcattggatctaggtgtcgattttaagcccgttgatacggtcgtc
caggtagggtctccgaagggggtggctcggtttttacagcgtgccggaagaagtgggcat
tcaccatttgaaacatcaaagatctattttatgcctacgcatgcactcgaactcctcgaa
gtagcggcaatcaaaacggccgcgaaaaccggccagattgaaagcagggagccttttgtc
ttgacttttgatgtcctgatacaatatctggtctcattagcagtgggaagtgggtttgat
gacaagattatctttgacgaggtcaaaaatacctttgcatttgcggatttattggaagag
gagtttcaatggtccatgcactttataacgcaaggagggagcagcttacacgcttaccct
gagttccataaagtggtactggatgaagcggatggattatggaaagtaaccagtcggcag
attgctatgcggcaccgcctgcatattgggactatcgtgagtgatgcgatgctgaaggtt
aaatttatgaagggtggttatatcggtatgatagaggaatattttgtttccaaacttaag
gctggtgatcgttttaatctagccgggaggagcttagagtttgtcatggtcagggatatg
cttgtgctggtgcgaaaaagtaatcataaaaaggcgataacaccgagctggcaagggggg
agattgccgttaagttccaatctgggagctatcttgcgtaccaagtacagtcaagtatta
gaaggaaatgaagaggaggaagaactgaaagtcataaagcccctattccaattgcaggag
gccattacacatgttccattagtggatgagtttttggtcgaattgattaaaaccagagaa
ggatatcatctttttgcttacccttttgaagggagactggtacatgaggtaatggctgca
ttggttgcctatcggatttccaaattaatgcctatcacattttctatcgctatgaacgac
tatggttttgagctgttgagtgatcagcagatcccgatggatgacgccatcgtctatgaa
gtcttttctcctgaaaacttgagtgaagatattaatgcaagtatcaatgctaccgagatg
gccaaaagaaaatttagggatattgcttgtatatcgggtttggtttttcagggttatccg
ggcaaatatatcaagaacaaacagatccaatcatcttcttctttatttttcgatgtcttt
gaatcttatgatcctcgtaacctattattgcgacaggcctatgatgagaattttcattat
caactggaggaaccgcgattgatgatggctttacaaagaatacagaaaagtgccattata
ttgaagactgccactaggtttacgcccttttctttccctataaaagtggacagtatgcgc
gagagtatgagttctgaggaacttgaagcacgaattgaaagaatgaaggccgaagtattt
aaagatttggataaagatggtgagcctaattaa

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