Sphingobacterium sp. ML3W: KO02_10585
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Entry
KO02_10585 CDS
T03258
Name
(GenBank) collagen-binding protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sht
Sphingobacterium sp. ML3W
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sht02000
]
KO02_10585
Transporters [BR:
sht02000
]
Other transporters
Pores ion channels [TC:
1
]
KO02_10585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
Plug
CarbopepD_reg_2
SdrD_B
SpaA
Big_1
NOMO_3rd
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
AIM37092
UniProt:
A0A088F0C6
LinkDB
All DBs
Position
2409744..2413067
Genome browser
AA seq
1107 aa
AA seq
DB search
MNIFFSKKHQLMTMLFLRTRNPQTNWALRLGVLGIVSMSCQVGFAQSTASVNGVVRDASN
HPITGATVSIENLTSKFKQVNTTNDDGMFSFERIPEGQGYVITISYVGFKTKVLNNYNID
SKDKVAITVALDQEQESLEEVVIVGYGKQRKANITGSVASVNADQLKNIAPSNLSNTLAG
RAAGINVTNTSGMAGASSSLRIRGSFAEPLYVIDGIVRDKAAFDALEANEVDQMSFLKDA
ATAAVYGTRAGNGVVVVTTKKGSAQEPVFNVQSNYTFGAPTQTLLADITTAADELTYQNR
VSQFNWENGDRSKPWVAPNGQTEFDYFKDKDYSVNDVIWRNPFSHRQSISVAGGGDRITY
YNLVSYRKENGSYQSLDHEKFNLRSNVSAKISDDFTIDVNISANQTNSKRFYWPFSTAAE
DDDFDVSDFYRVTFNWPKMYPFYLNADGSPSNSRTDFPVQTPMGSWQAWNVIDQVMGDRY
IDRKVRQVNPIMTLNYKLDKLVEGLSTKVVGSYLAQDYMRKRFMTFQKNYTFTSLNPDGN
RFIPAPPSEDKVNIFTFSQAQPFMDYSPEREWEYQVNWFLNYNLKFNKHTIDALLVYEQF
KAGGTYVNSRAENPIVSLDQMFIYPTDRNFRSTNAYESINSRRGIIGRANYNYSDKYIAE
FSFRYDGSPLFPGDKRWGLFPSVSAAWRVSEEGFFSNIKNTFSDLKLRASYGTTGNDLNV
NAERIGQFLYQEKYRPSGGYMFGDRYYNGVAYGATPTQNLTWTTSKSVNIGVDFGFINNK
LTGSLDVFNRKETDILGPRSLTVPDNYGRELAPENYAARSYKGGEISLNWNDRIGEVSYG
LTANMGYAKDRWDIYDEEPSYGPDGTQNFRTRIGRPENRIIGLEAVDLVRTQQQLDELKD
QGFKTYGRDPYLGMIMYKDIRGANYSDTPDGKIDDNDMMLLSENNTPRINYGFGLNANWK
GFSVSALLQGVLAYDRIISNQEGGGMRQHGGAFRPYYPIWAGDVWTSENEDAQYPRVVGS
NWAEAGTGTSSFWIRNGAYLRLRDLNISYGLPKSVSDAMKIKSVNVFFNGTNLFVLSPMK
EFHDPEQKMYDSYPVMKTFTLGLDIKF
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttttttttccaaaaagcatcaattgatgacgatgctgttcctgaggactagg
aaccctcagactaactgggcccttcgcttgggtgtgctgggtattgtcagcatgagttgc
caggtcggatttgcacaatcgacagcttccgttaacggcgtggtcagggatgcgagtaat
catccaattacaggagcaactgttagtattgaaaatctgacaagtaaatttaagcaggtc
aatacaacaaatgatgatggcatgttttcatttgaacgcattccagaagggcagggatat
gtcatcacgatcagctatgtgggctttaaaaccaaagtgctcaataattacaatattgac
tccaaggataaagttgccataacggttgcactggatcaagagcaagaaagtctggaagag
gtagtcatagtagggtatgggaagcaacgtaaagcaaacataacgggttcggtcgcttct
gttaatgcagatcaattgaagaatattgctccctcaaatctatccaataccttagcagga
cgagcggcagggattaatgtgaccaatacttccggtatggctggggcttcttctagtttg
cgtatacgaggtagctttgcagaacccttatatgttatcgacggaatcgttcgagataaa
gcggcttttgatgctctggaggccaatgaggtcgatcagatgagttttctgaaggatgcc
gctactgctgcggtgtatggtacgcgagctggaaatggagttgtcgtggtaacaacgaaa
aaggggtctgctcaagaacctgttttcaatgtacaaagcaattatactttcggtgcaccc
actcaaacacttttggcggatattactacagcagcagatgagttgacctatcaaaataga
gtttctcaatttaattgggaaaatggagatcgttctaagccttgggtagcacctaatgga
cagaccgagttcgactattttaaagataaagattacagcgtcaatgatgtgatctggagg
aatccgtttagccatagacaatcaatttcagttgccggtggaggagatcggattacctat
tataatttggttagttaccgtaaagaaaatgggtcgtaccaatctttagatcacgaaaag
ttcaatttaagaagtaacgttagcgctaaaatttcagatgattttaccatagatgtcaat
atatctgccaaccagactaattctaaacggttttattggccattcagtactgcggcagag
gatgatgattttgatgtttcggatttttatcgggtcactttcaattggccaaagatgtat
ccattttacctcaatgccgatggttctcccagtaattcacgcacggattttccagtccag
actcctatgggaagctggcaggcttggaatgtaatcgatcaagtgatgggagatcgttat
atcgaccgtaaggtgcgacaagttaatccgattatgaccctaaattataaattggataaa
cttgtagagggcttgtctaccaaagtggtcggtagttatctagcacaagattatatgcgg
aaacgattcatgacgttccagaagaattatacgttcacgtcattgaatcctgatggtaat
cgattcattcccgcacctccttctgaagataaggtgaatatatttacgttcagtcaggca
caaccatttatggattattctcctgagcgggaatgggaataccaagtcaactggttcttg
aactataacctgaaattcaataaacataccatcgacgctttactggtctatgaacaattt
aaagcgggaggtacatatgtgaattcgcgtgctgaaaatccaattgtgagtttagatcag
atgttcatctatccaacagatcgtaattttagatcgacaaatgcatatgaaagtatcaat
tcgagaagagggatcatcggacgagcgaactataattattcggataagtatattgcagaa
ttttcgttccgatatgatggatctccgctgtttccaggagacaaacgttggggattgttc
ccatccgtatctgcggcttggcgtgtatctgaagaaggtttcttttccaatattaaaaac
actttcagtgacttgaagcttagagcttcttatggtactacaggaaatgatttgaatgtc
aatgccgaaagaattggacaatttctttatcaagaaaaatatagaccgtctggcgggtac
atgtttggagaccgctactataatggtgtagcttatggagcgactcctactcaaaacctg
acgtggacgacttctaagagtgtcaatattggtgtagattttggttttatcaataacaaa
ttgacgggttctttggatgtattcaaccgtaaagaaacggatatcttgggtccacggtcg
ctgactgttccggacaattatggacgggaactagctccggagaattatgctgcaagaagt
tataaaggtggcgagatatccctaaattggaatgaccgtataggagaagtgtcttatggc
ctgactgcaaatatggggtatgcaaaagaccgttgggatatatacgatgaagaaccttcg
tacggccctgatgggactcaaaatttcaggacccgtatcggaagacctgaaaatcggatc
atcggtcttgaggctgtcgatctagtgaggacacagcagcagctcgatgaactgaaagat
caaggtttcaaaacctacggacgtgatccatatttgggcatgattatgtataaagatatt
cgaggagccaactattcggacacaccggatgggaagatcgatgataacgatatgatgttg
ctttctgaaaacaatacgccccgaatcaattatggctttgggttgaatgccaattggaaa
gggttttcagtttcagcattgcttcagggggtattggcctatgaccggatcatcagcaat
caagaaggaggaggaatgcgccagcatgggggtgctttccgaccatattatcccatatgg
gctggcgatgtatggacttcagaaaatgaagacgcacaatatccaagggtcgtaggttca
aactgggcagaggcaggtactggcacttcgagtttctggatacgtaatggcgcatattta
cgtttacgtgatttgaacatttcttatggattgccaaaatctgtttccgatgccatgaag
ataaaaagtgtgaacgtcttctttaatggaacaaatttatttgtactatcaccaatgaag
gaatttcatgatccagaacaaaaaatgtatgactcttatcccgtcatgaaaacgttcaca
ttaggtttggacattaaattttaa
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