Sphingobacterium sp. ML3W: KO02_12925
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Entry
KO02_12925 CDS
T03258
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sht
Sphingobacterium sp. ML3W
Pathway
sht03030
DNA replication
sht03430
Mismatch repair
sht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KO02_12925
03430 Mismatch repair
KO02_12925
03440 Homologous recombination
KO02_12925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sht03032
]
KO02_12925
03400 DNA repair and recombination proteins [BR:
sht03400
]
KO02_12925
Enzymes [BR:
sht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KO02_12925
DNA replication proteins [BR:
sht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KO02_12925
DNA repair and recombination proteins [BR:
sht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KO02_12925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
AIM37493
UniProt:
A0A088EZA3
LinkDB
All DBs
Position
complement(2904549..2908973)
Genome browser
AA seq
1474 aa
AA seq
DB search
MYIIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDDMGNLLEHEDYLIKPDGYNIPY
DSEKIHGISTELAAEQGVPIQDVLVKFNAALAKAKFVVGQNIGFDLNIMGCEFYRYDVES
PMGDMAILDTCTEVTAGLLQLPGGRGGRFKLPNLTELHSYLFGVPFAEAHNATADVEATT
RCFFELVRREVFTLDQLQADTGYFVDFKQNNPIVIPTVGLKHVNLKAASDEIRKRNKPSG
EQNIVIDHDVLNDFENADFAHLHNHSQFSVLQSTISIANLVDTAAKYRMPAVALTDHGNM
MGAFHFVSKVGDHNKAAKAKNEELEAAGESPTEKIIKPIVGCEFFVCDDHFDKKRKDNGY
QIVFLAKNKKGYHNLAKMASVAYTEGFYYVPRIDRKVVEQYKEDLIVLSGNLQGEVPNKV
LNIGENQAEEALLWWKEQFGSDFYMELMRHGQEDEDRVNTTLISLARKHDVKLIATNNTY
YINQADAHAHDILLCVKDGEKLSTPKGRGRGFRFGLPNQEYYFKPAAEMKKIFKDVPEAI
INIQDIVDKIEIFTLYRDVLLPAFDIPVEFQFEEDQQDKGKRGENKYLRYLTLEGAKRRY
KDGVTDAIMERLDFELTVIEKTGYPGYFLIVQDFIAEARRMGVSVGPGRGSAAGSAVAYC
LGITNLDPIQYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMQYVIDKYGASQVAQIITY
GTMAAKSSIKDTARVLDLPLQEANEIAKLIPNLKLAKIFNMDEKALKETLRADELEAVNR
LIAISEGAGLEAETIKQARVLEGSMRNTGIHACGVIITPDDITNFVPVSLAKDSDLYVTQ
FDNSVVESAGLLKMDFLGLKTLTLIKDTVANVKLSNGLELDPDEFPIDDLLTYELFQRGE
TVGVFQYESPGMQKHMKDLRPTVFADLIAMNALYRPGPMENIPSFIKRKHGTEPIVYDLD
ACEEYLQETYGISVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKQKAVLDKMKPKFIAQA
EEKGHNPKILEKIWTDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHFPAEYMAAVLSNNM
NDIKQVTFFMEECKRMGLEVLAPDVNESHYKFTVNDRGAIRFGMGAVKGVGAGAVDTIVQ
TRASGPYKSVFDLAKRIDLRAANKKAFESLAYAGGFDGFQNMHRAQYFHAEDNSTGLEKA
IKFAQRFKENENSAQASLFGGEGMADLPEPVLMSCPPWGLIEKLKYEKEVIGIYLTSHPL
DNYKFEIKHFCQNKVSDLQLINKVKASEVEEDVLLDFNRIKNKEVVIGGIIALANHRIAK
SGKPFGSFIIEDYSDSYEIMVFGEDYVKFKGYLEEGYFVQLRGLVQERFKQVGNWGFEIK
AIQLLSDLREKMAKIFTINIALPALNDIFLEEMKQVLDANEIEGVVPNCQLRFKIFDPQD
EISIEMPSKLKRINLTNEFLDAIERFEGVNYRLN
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtacattatatttgatacggaaacaacaggattgcccaaacgttgggatgcgccgatt
acagatactgataattggccgagatgtattcaaatagcttggcagttgcacgacgatatg
ggtaacctgctggagcatgaggattacttgattaaaccagatggttacaatattccttac
gattccgagaaaattcatggtatatcgactgaattggctgccgaacagggtgttccaatt
caagacgtattagtgaaattcaatgctgcattggcaaaagctaagtttgtagtggggcaa
aatattggttttgacctcaatatcatgggctgtgagttttatcgctatgatgtcgagtcg
ccaatgggtgatatggctattttggatacttgtacggaagtaactgcaggcttactgcaa
ttacctggaggtcgtggtggtcgatttaaattgcctaatttaacggaactccattcttac
ctttttggtgtgccttttgccgaagcgcacaacgctacggccgatgtggaggcaacaact
cgttgtttcttcgaattggtaaggagagaagtttttacccttgatcagttacaggcggat
acaggttattttgttgattttaagcaaaataatcctattgtaatcccaactgtcggattg
aagcatgtgaatctaaaggcagcttcagatgaaatccgcaaacgtaataaaccaagtggt
gagcaaaatatcgtcatcgaccatgatgtgttgaacgattttgaaaatgcagattttgcg
catttgcataatcactctcaattttcggtgcttcaatctacaatctctattgctaatctg
gtagatacagctgctaaataccggatgcctgctgttgcgctaacggatcatggtaatatg
atgggtgcatttcactttgtgtctaaggttggtgatcataataaggctgcgaaagctaaa
aatgaagagttagaagctgcgggagagagtcctactgagaagataatcaagcctattgtt
ggctgtgagtttttcgtatgtgacgaccactttgataagaagagaaaagataacggttat
cagattgtctttttggctaagaataaaaaaggttatcataatctcgcaaagatggcatct
gtagcctatacggagggcttttattatgtacctcgtatcgatagaaaagtcgttgaacaa
tataaagaggatttaatcgtcttgtcgggtaatttacaaggggaggtgccaaataaggtg
ctcaatattggtgaaaatcaagctgaggaagctttgctttggtggaaagagcaatttggg
tctgatttttacatggaattgatgcgccatggtcaggaggatgaggatcgggtaaatacg
actttgattagtttggcacgcaagcatgatgtgaaattgattgcgaccaataatacttat
tatatcaaccaagcggatgcacatgcgcatgatattttgttgtgcgtgaaagacggtgaa
aagttaagtacaccaaagggtcgtggtcgtggatttcgttttggattgcctaatcaagaa
tattacttcaaacctgctgcagaaatgaagaaaatatttaaagatgtgcccgaagcaatc
atcaatattcaagatatcgttgacaagattgagatctttactttataccgcgatgtttta
ttgcctgcatttgatattcctgtggagtttcagtttgaagaggatcaacaggacaaaggt
aaaaggggagaaaataaatacttaaggtatctgacgcttgagggtgctaaacgccgttat
aaggacggtgtgaccgatgctattatggagcgcttggactttgagttgactgttattgaa
aagacaggttatcctggttatttcttaattgtacaggattttattgcagaagcgcgcaga
atgggggtctctgttgggcctgggcgtggttcggcagcgggttctgctgttgcctattgt
ttaggtattaccaatttagatcctattcagtatgatttgctatttgagcgcttcttaaac
ccggatcgtgtttcaatgcccgatatcgatattgactttgacgatgagggacgtggacgt
gtgatgcagtatgttattgataaatatggtgcgtcgcaagttgcccaaattatcacctat
ggtacaatggctgctaaatcttctataaaggatactgcgcgggtattggacttgccttta
caggaggctaatgaaattgctaaattgattccaaacctgaaattggccaagatctttaat
atggatgaaaaggctttgaaagaaacgttgcgtgcggatgaattggaggctgtcaatcgt
ttaatagccatatctgaaggtgctggtctagaagctgaaaccattaagcaggcgcgcgta
ttggaggggtcaatgcgtaatactggaatccatgcttgtggggttatcatcactccggat
gacatcacgaattttgttccggtttcgttggcaaaagactcggatctgtatgtgacgcag
tttgataactcggtggttgagtctgcaggattgctgaaaatggattttttgggtttgaaa
acgttgaccttgattaaggatacggttgcaaatgttaaactgagcaatgggctcgagtta
gatccggatgagtttccaatcgatgatttgttgacttacgagttattccaaaggggagaa
actgtcggtgtgtttcagtatgagtcacctggtatgcagaagcatatgaaagatttgagg
ccaactgtgtttgccgatttaatcgcgatgaatgcgctttatagacccggtccaatggag
aatattccgagttttattaagcgtaagcacggtacggaacctattgtatatgatttggat
gcttgcgaagagtatctgcaagagacctacggtattagtgtgtaccaagagcaggtaatg
cttctttcgcaaaaattagcgggattttctaaaggtgatgccgacgttttacgtaaggcc
atgggaaaaaagcaaaaggctgtcttggataagatgaagccgaagtttattgcccaagca
gaggaaaaaggtcataatccgaaaattctggaaaaaatatggaccgactgggaggcattt
gcaagttacgcctttaataagtcgcactctacctgttatgcatggatcgcttatcaaacg
gcttatttgaaagcacattttccagcggaatatatggcggctgtactttctaataacatg
aacgatattaagcaggtcaccttctttatggaggagtgtaagcgtatgggattggaagta
ttggctccagatgtaaatgagtctcactataagtttacggtgaacgaccgtggtgcaatt
cgatttgggatgggtgctgtaaaaggtgttggggcaggagcagtagataccattgtacag
acgcgtgcttcaggaccttataaatcagtttttgatttagcaaaacgtatcgatctacgt
gctgccaataaaaaagcatttgagagtttggcttatgccggtggttttgatggttttcaa
aatatgcatcgtgcgcaatatttccatgcagaggataactcgaccggattggagaaggca
atcaaatttgcgcagcgttttaaagaaaatgaaaattctgctcaagcgagcttatttgga
ggggagggaatggcagatcttccggaacctgttttgatgtcgtgtccaccttggggtctt
atcgagaagttgaaatacgagaaagaagtgatcggtatttacctgacgagtcatcctttg
gataattataaatttgaaatcaagcatttctgtcagaataaagtgagtgacctgcaattg
atcaataaggtgaaagcttctgaagtggaggaggatgttctgttagattttaatcggatc
aaaaataaagaagttgtcattggggggattatcgcactcgcgaatcatcgaatagcgaag
tctggaaaaccttttggctcatttatcattgaggattactctgattcttatgaaattatg
gtatttggtgaggattatgtgaagtttaaaggttatttggaggaaggatattttgttcaa
cttcgcggtttggtgcaggagcgatttaaacaggtgggtaactggggttttgagattaag
gccattcagctattgtcggatttaagggaaaaaatggcgaaaattttcacgataaatatt
gcgctcccagcattgaatgatatctttttagaagagatgaaacaagtgttggatgcaaat
gaaattgagggggttgtacctaattgtcaattgcgtttcaaaattttcgatccacaggat
gaaatttcaattgaaatgccatccaaattaaaacgtatcaatttgacaaatgaattttta
gatgcgattgaacggtttgaaggggtaaattatcgattgaattaa
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